Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HOXC10Q9NYD6 AC097374.2-201ENST00000618617 1306 ntBASIC20.77■□□□□ 0.91
HOXC10Q9NYD6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
HOXC10Q9NYD6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
HOXC10Q9NYD6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.76■□□□□ 0.91
HOXC10Q9NYD6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC10Q9NYD6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC10Q9NYD6 AC021087.4-201ENST00000563761 564 ntBASIC20.76■□□□□ 0.91
HOXC10Q9NYD6 MIR7706-201ENST00000613747 67 ntBASIC20.76■□□□□ 0.91
HOXC10Q9NYD6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
HOXC10Q9NYD6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC10Q9NYD6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.76■□□□□ 0.91
HOXC10Q9NYD6 AC116407.3-201ENST00000623905 1129 ntBASIC20.76■□□□□ 0.91
HOXC10Q9NYD6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC10Q9NYD6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
HOXC10Q9NYD6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
HOXC10Q9NYD6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC10Q9NYD6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
HOXC10Q9NYD6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.76■□□□□ 0.91
HOXC10Q9NYD6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
HOXC10Q9NYD6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.76■□□□□ 0.91
HOXC10Q9NYD6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 AC005082.1-201ENST00000413042 2259 ntBASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 AL356309.3-201ENST00000624132 1934 ntBASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC10Q9NYD6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 ZNF259P1-201ENST00000407656 1365 ntBASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 SART3-203ENST00000546611 1184 ntBASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC10Q9NYD6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.73■□□□□ 0.91
HOXC10Q9NYD6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms