Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 AC067852.2-201ENST00000590513 2313 ntBASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 KRT18P48-201ENST00000434763 852 ntBASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 RNF126P1-202ENST00000569893 925 ntBASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 AC004263.2-201ENST00000617183 678 ntBASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
BLOC1S4Q9NUP1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
BLOC1S4Q9NUP1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
BLOC1S4Q9NUP1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BLOC1S4Q9NUP1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BLOC1S4Q9NUP1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BLOC1S4Q9NUP1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.2■□□□□ 0.82
BLOC1S4Q9NUP1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
BLOC1S4Q9NUP1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.2■□□□□ 0.82
BLOC1S4Q9NUP1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
BLOC1S4Q9NUP1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.2■□□□□ 0.82
BLOC1S4Q9NUP1 IGHGP-201ENST00000390555 1178 ntBASIC20.2■□□□□ 0.82
BLOC1S4Q9NUP1 SLC25A6P5-201ENST00000435663 894 ntBASIC20.2■□□□□ 0.82
BLOC1S4Q9NUP1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
BLOC1S4Q9NUP1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.2■□□□□ 0.82
BLOC1S4Q9NUP1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.2■□□□□ 0.82
BLOC1S4Q9NUP1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BLOC1S4Q9NUP1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BLOC1S4Q9NUP1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BLOC1S4Q9NUP1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
BLOC1S4Q9NUP1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BLOC1S4Q9NUP1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BLOC1S4Q9NUP1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.2■□□□□ 0.82
BLOC1S4Q9NUP1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BLOC1S4Q9NUP1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
BLOC1S4Q9NUP1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BLOC1S4Q9NUP1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
BLOC1S4Q9NUP1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BLOC1S4Q9NUP1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.19■□□□□ 0.82
BLOC1S4Q9NUP1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BLOC1S4Q9NUP1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BLOC1S4Q9NUP1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.19■□□□□ 0.82
BLOC1S4Q9NUP1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.19■□□□□ 0.82
BLOC1S4Q9NUP1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.19■□□□□ 0.82
BLOC1S4Q9NUP1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BLOC1S4Q9NUP1 ZNF444P1-201ENST00000559497 298 ntBASIC20.19■□□□□ 0.82
BLOC1S4Q9NUP1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
BLOC1S4Q9NUP1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.19■□□□□ 0.82
BLOC1S4Q9NUP1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BLOC1S4Q9NUP1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.19■□□□□ 0.82
BLOC1S4Q9NUP1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.19■□□□□ 0.82
BLOC1S4Q9NUP1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
BLOC1S4Q9NUP1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.19■□□□□ 0.82
BLOC1S4Q9NUP1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BLOC1S4Q9NUP1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
BLOC1S4Q9NUP1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 AC100803.2-201ENST00000562459 1963 ntBASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 AL031133.1-201ENST00000406807 723 ntBASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.18■□□□□ 0.82
BLOC1S4Q9NUP1 AP003733.1-201ENST00000491725 852 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms