Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 BID-214ENST00000617586 542 ntTSL 5 BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 AC231657.2-201ENST00000624556 255 ntBASIC21.48■■□□□ 1.03
RTN4Q9NQC3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTN4Q9NQC3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
RTN4Q9NQC3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTN4Q9NQC3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.47■■□□□ 1.03
RTN4Q9NQC3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RTN4Q9NQC3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTN4Q9NQC3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTN4Q9NQC3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTN4Q9NQC3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTN4Q9NQC3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTN4Q9NQC3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RTN4Q9NQC3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RTN4Q9NQC3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RTN4Q9NQC3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTN4Q9NQC3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTN4Q9NQC3 AP001094.4-201ENST00000579008 2176 ntBASIC21.47■■□□□ 1.03
RTN4Q9NQC3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTN4Q9NQC3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RTN4Q9NQC3 TEX21P-204ENST00000641479 1693 ntBASIC21.47■■□□□ 1.03
RTN4Q9NQC3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 AC018553.1-201ENST00000616682 1458 ntBASIC21.46■■□□□ 1.03
RTN4Q9NQC3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 AC007322.1-201ENST00000426983 750 ntBASIC21.46■■□□□ 1.03
RTN4Q9NQC3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTN4Q9NQC3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
RTN4Q9NQC3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.45■■□□□ 1.03
RTN4Q9NQC3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC21.45■■□□□ 1.03
RTN4Q9NQC3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.45■■□□□ 1.02
RTN4Q9NQC3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTN4Q9NQC3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
RTN4Q9NQC3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTN4Q9NQC3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC21.45■■□□□ 1.02
RTN4Q9NQC3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
RTN4Q9NQC3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
RTN4Q9NQC3 AL512625.2-201ENST00000417533 625 ntBASIC21.45■■□□□ 1.02
RTN4Q9NQC3 AC093787.1-201ENST00000450396 207 ntBASIC21.45■■□□□ 1.02
RTN4Q9NQC3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.45■■□□□ 1.02
RTN4Q9NQC3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.45■■□□□ 1.02
RTN4Q9NQC3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.45■■□□□ 1.02
RTN4Q9NQC3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTN4Q9NQC3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTN4Q9NQC3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC21.45■■□□□ 1.02
RTN4Q9NQC3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTN4Q9NQC3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RTN4Q9NQC3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
RTN4Q9NQC3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RTN4Q9NQC3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
RTN4Q9NQC3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTN4Q9NQC3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RTN4Q9NQC3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTN4Q9NQC3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC21.45■■□□□ 1.02
RTN4Q9NQC3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.45■■□□□ 1.02
RTN4Q9NQC3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RTN4Q9NQC3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTN4Q9NQC3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms