Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 KRT18P38-201ENST00000449496 1282 ntBASIC15.91■□□□□ 0.14
CDH20Q9HBT6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 AL136038.4-201ENST00000603606 1261 ntBASIC15.91■□□□□ 0.14
CDH20Q9HBT6 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.91■□□□□ 0.14
CDH20Q9HBT6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH20Q9HBT6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH20Q9HBT6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH20Q9HBT6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CDH20Q9HBT6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH20Q9HBT6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH20Q9HBT6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH20Q9HBT6 AC099343.3-201ENST00000605834 2503 ntBASIC15.9■□□□□ 0.14
CDH20Q9HBT6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH20Q9HBT6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH20Q9HBT6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH20Q9HBT6 MIR1224-201ENST00000408193 85 ntBASIC15.9■□□□□ 0.14
CDH20Q9HBT6 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.9■□□□□ 0.14
CDH20Q9HBT6 PVRIG2P-201ENST00000435460 978 ntBASIC15.9■□□□□ 0.14
CDH20Q9HBT6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.9■□□□□ 0.14
CDH20Q9HBT6 AL671277.2-201ENST00000458060 996 ntBASIC15.9■□□□□ 0.14
CDH20Q9HBT6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
CDH20Q9HBT6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
CDH20Q9HBT6 NTF6B-201ENST00000591913 560 ntBASIC15.9■□□□□ 0.14
CDH20Q9HBT6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH20Q9HBT6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH20Q9HBT6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH20Q9HBT6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH20Q9HBT6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH20Q9HBT6 GMCL1P1-201ENST00000463439 1581 ntBASIC15.9■□□□□ 0.14
CDH20Q9HBT6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH20Q9HBT6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH20Q9HBT6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH20Q9HBT6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH20Q9HBT6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CDH20Q9HBT6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH20Q9HBT6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 AC090164.3-201ENST00000610780 2143 ntBASIC15.89■□□□□ 0.13
CDH20Q9HBT6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 LINC01311-201ENST00000565162 1445 ntBASIC15.89■□□□□ 0.13
CDH20Q9HBT6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 AC087388.1-201ENST00000571370 1112 ntBASIC15.89■□□□□ 0.13
CDH20Q9HBT6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 AC008687.5-201ENST00000593746 558 ntBASIC15.89■□□□□ 0.13
CDH20Q9HBT6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 AC020916.1-201ENST00000587762 1774 ntBASIC15.89■□□□□ 0.13
CDH20Q9HBT6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH20Q9HBT6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms