Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CFAP54Q96N23 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CFAP54Q96N23 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.74■□□□□ 0.43
CFAP54Q96N23 AC073621.1-201ENST00000392730 636 ntBASIC17.74■□□□□ 0.43
CFAP54Q96N23 AL132655.2-201ENST00000596276 594 ntBASIC17.74■□□□□ 0.43
CFAP54Q96N23 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CFAP54Q96N23 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CFAP54Q96N23 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.74■□□□□ 0.43
CFAP54Q96N23 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CFAP54Q96N23 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CFAP54Q96N23 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CFAP54Q96N23 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CFAP54Q96N23 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CFAP54Q96N23 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CFAP54Q96N23 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.74■□□□□ 0.43
CFAP54Q96N23 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.74■□□□□ 0.43
CFAP54Q96N23 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.74■□□□□ 0.43
CFAP54Q96N23 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CFAP54Q96N23 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CFAP54Q96N23 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.74■□□□□ 0.43
CFAP54Q96N23 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.74■□□□□ 0.43
CFAP54Q96N23 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.74■□□□□ 0.43
CFAP54Q96N23 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CFAP54Q96N23 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
CFAP54Q96N23 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CFAP54Q96N23 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.74■□□□□ 0.43
CFAP54Q96N23 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CFAP54Q96N23 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CFAP54Q96N23 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CFAP54Q96N23 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CFAP54Q96N23 AC023141.5-201ENST00000458585 616 ntBASIC17.73■□□□□ 0.43
CFAP54Q96N23 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.73■□□□□ 0.43
CFAP54Q96N23 MIR3180-4-201ENST00000582223 153 ntBASIC17.73■□□□□ 0.43
CFAP54Q96N23 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP54Q96N23 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP54Q96N23 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP54Q96N23 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.73■□□□□ 0.43
CFAP54Q96N23 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP54Q96N23 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.73■□□□□ 0.43
CFAP54Q96N23 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.73■□□□□ 0.43
CFAP54Q96N23 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.73■□□□□ 0.43
CFAP54Q96N23 TSPY16P-201ENST00000449843 468 ntBASIC17.73■□□□□ 0.43
CFAP54Q96N23 AC018845.2-201ENST00000568326 409 ntBASIC17.73■□□□□ 0.43
CFAP54Q96N23 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP54Q96N23 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.73■□□□□ 0.43
CFAP54Q96N23 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.73■□□□□ 0.43
CFAP54Q96N23 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.73■□□□□ 0.43
CFAP54Q96N23 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.73■□□□□ 0.43
CFAP54Q96N23 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP54Q96N23 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP54Q96N23 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP54Q96N23 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.73■□□□□ 0.43
CFAP54Q96N23 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP54Q96N23 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.73■□□□□ 0.43
CFAP54Q96N23 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CFAP54Q96N23 AC073130.3-201ENST00000624389 2278 ntBASIC17.73■□□□□ 0.43
CFAP54Q96N23 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.73■□□□□ 0.43
CFAP54Q96N23 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CFAP54Q96N23 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CFAP54Q96N23 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CFAP54Q96N23 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CFAP54Q96N23 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CFAP54Q96N23 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CFAP54Q96N23 CRB3P1-201ENST00000449338 276 ntBASIC17.72■□□□□ 0.43
CFAP54Q96N23 LINC00628-201ENST00000628516 1289 ntBASIC17.72■□□□□ 0.43
CFAP54Q96N23 AL513210.1-201ENST00000629608 234 ntBASIC17.72■□□□□ 0.43
CFAP54Q96N23 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.72■□□□□ 0.43
CFAP54Q96N23 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.72■□□□□ 0.43
CFAP54Q96N23 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CFAP54Q96N23 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CFAP54Q96N23 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CFAP54Q96N23 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CFAP54Q96N23 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.72■□□□□ 0.43
CFAP54Q96N23 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.72■□□□□ 0.43
CFAP54Q96N23 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.72■□□□□ 0.43
CFAP54Q96N23 HCG4B-203ENST00000450128 991 ntBASIC17.72■□□□□ 0.43
CFAP54Q96N23 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.72■□□□□ 0.43
CFAP54Q96N23 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CFAP54Q96N23 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CFAP54Q96N23 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CFAP54Q96N23 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CFAP54Q96N23 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP54Q96N23 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP54Q96N23 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP54Q96N23 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP54Q96N23 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP54Q96N23 TFAMP1-201ENST00000412727 736 ntBASIC17.71■□□□□ 0.43
CFAP54Q96N23 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.71■□□□□ 0.43
CFAP54Q96N23 AC025678.2-201ENST00000562061 970 ntBASIC17.71■□□□□ 0.43
CFAP54Q96N23 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
CFAP54Q96N23 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP54Q96N23 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.71■□□□□ 0.43
CFAP54Q96N23 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP54Q96N23 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP54Q96N23 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP54Q96N23 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CFAP54Q96N23 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP54Q96N23 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP54Q96N23 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP54Q96N23 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms