Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 AL353801.3-201ENST00000609898 542 ntBASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 NSUN5P1-202ENST00000421140 1535 ntBASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 NSUN5P2-203ENST00000457352 1529 ntBASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V0A1Q93050 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V0A1Q93050 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.31■□□□□ 0.84
ATP6V0A1Q93050 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V0A1Q93050 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP6V0A1Q93050 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V0A1Q93050 WIZP1-201ENST00000531444 2299 ntBASIC20.31■□□□□ 0.84
ATP6V0A1Q93050 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V0A1Q93050 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V0A1Q93050 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ATP6V0A1Q93050 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V0A1Q93050 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V0A1Q93050 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP6V0A1Q93050 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.31■□□□□ 0.84
ATP6V0A1Q93050 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP6V0A1Q93050 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V0A1Q93050 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP6V0A1Q93050 AC011840.4-201ENST00000578471 627 ntBASIC20.31■□□□□ 0.84
ATP6V0A1Q93050 AP005901.3-202ENST00000581653 237 ntBASIC20.31■□□□□ 0.84
ATP6V0A1Q93050 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.31■□□□□ 0.84
ATP6V0A1Q93050 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V0A1Q93050 AC087289.5-201ENST00000586076 3175 ntBASIC20.31■□□□□ 0.84
ATP6V0A1Q93050 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V0A1Q93050 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ATP6V0A1Q93050 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 AC091607.1-201ENST00000490318 1060 ntBASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP6V0A1Q93050 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 ESPNP-201ENST00000270691 2015 ntBASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 TSPY12P-201ENST00000421279 868 ntBASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 AP000347.1-202ENST00000435868 847 ntBASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 KRT16P4-201ENST00000453883 522 ntBASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 AL138781.2-201ENST00000617896 1843 ntBASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP6V0A1Q93050 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP6V0A1Q93050 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms