Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RAPGEF4Q8WZA2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC23.76■■□□□ 1.39
RAPGEF4Q8WZA2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
RAPGEF4Q8WZA2 AC005082.1-201ENST00000413042 2259 ntBASIC23.76■■□□□ 1.39
RAPGEF4Q8WZA2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RAPGEF4Q8WZA2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC23.76■■□□□ 1.39
RAPGEF4Q8WZA2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
RAPGEF4Q8WZA2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC23.76■■□□□ 1.39
RAPGEF4Q8WZA2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC23.76■■□□□ 1.39
RAPGEF4Q8WZA2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
RAPGEF4Q8WZA2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
RAPGEF4Q8WZA2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
RAPGEF4Q8WZA2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
RAPGEF4Q8WZA2 AC092910.1-201ENST00000482027 1129 ntBASIC23.76■■□□□ 1.39
RAPGEF4Q8WZA2 AC012640.2-201ENST00000561606 901 ntBASIC23.76■■□□□ 1.39
RAPGEF4Q8WZA2 AC027601.4-201ENST00000611259 610 ntBASIC23.76■■□□□ 1.39
RAPGEF4Q8WZA2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC23.76■■□□□ 1.39
RAPGEF4Q8WZA2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RAPGEF4Q8WZA2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC23.76■■□□□ 1.39
RAPGEF4Q8WZA2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RAPGEF4Q8WZA2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
RAPGEF4Q8WZA2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RAPGEF4Q8WZA2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RAPGEF4Q8WZA2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RAPGEF4Q8WZA2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC23.75■■□□□ 1.39
RAPGEF4Q8WZA2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RAPGEF4Q8WZA2 AC098831.1-202ENST00000438821 336 ntBASIC23.75■■□□□ 1.39
RAPGEF4Q8WZA2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC23.75■■□□□ 1.39
RAPGEF4Q8WZA2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC23.75■■□□□ 1.39
RAPGEF4Q8WZA2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC23.75■■□□□ 1.39
RAPGEF4Q8WZA2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RAPGEF4Q8WZA2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RAPGEF4Q8WZA2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
RAPGEF4Q8WZA2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RAPGEF4Q8WZA2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RAPGEF4Q8WZA2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC23.74■■□□□ 1.39
RAPGEF4Q8WZA2 PGAM5P1-201ENST00000518923 814 ntBASIC23.74■■□□□ 1.39
RAPGEF4Q8WZA2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RAPGEF4Q8WZA2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RAPGEF4Q8WZA2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RAPGEF4Q8WZA2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
RAPGEF4Q8WZA2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
RAPGEF4Q8WZA2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF4Q8WZA2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF4Q8WZA2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF4Q8WZA2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF4Q8WZA2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF4Q8WZA2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF4Q8WZA2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC23.73■■□□□ 1.39
RAPGEF4Q8WZA2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC23.73■■□□□ 1.39
RAPGEF4Q8WZA2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC23.73■■□□□ 1.39
RAPGEF4Q8WZA2 NKAPP1-205ENST00000585790 367 ntBASIC23.73■■□□□ 1.39
RAPGEF4Q8WZA2 AC140113.2-201ENST00000604370 208 ntBASIC23.73■■□□□ 1.39
RAPGEF4Q8WZA2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC23.73■■□□□ 1.39
RAPGEF4Q8WZA2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF4Q8WZA2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF4Q8WZA2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC23.73■■□□□ 1.39
RAPGEF4Q8WZA2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF4Q8WZA2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 FAM220CP-201ENST00000395253 831 ntBASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 MED15P5-201ENST00000423150 992 ntBASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 SRP19-202ENST00000445150 833 ntTSL 2 BASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 AC034105.1-201ENST00000563488 319 ntBASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 MTDHP4-201ENST00000600287 670 ntBASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 FAM197Y3-203ENST00000618346 717 ntBASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 AC008735.5-201ENST00000623544 497 ntBASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
RAPGEF4Q8WZA2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 AC116562.4-201ENST00000641316 2276 ntBASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 INIP-202ENST00000374236 874 ntTSL 2 BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 LBH-204ENST00000406087 559 ntTSL 4 BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms