Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 AC093010.1-201ENST00000473625 1624 ntBASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 LINC01126-201ENST00000623515 1646 ntBASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 AC009947.2-201ENST00000444014 672 ntBASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 AL024508.2-201ENST00000607749 1894 ntBASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 AC093827.2-201ENST00000512654 315 ntBASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSMEM1Q8N8F7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 LINC01568-207ENST00000641790 1380 ntBASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 AP000523.1-201ENST00000398242 1049 ntBASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 KRT18P22-201ENST00000402024 1347 ntBASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LSMEM1Q8N8F7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
LSMEM1Q8N8F7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LSMEM1Q8N8F7 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms