Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 AC112907.2-201ENST00000448639 330 ntBASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 AC092597.1-201ENST00000487352 616 ntBASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.65■□□□□ 0.58
ATPAF2Q8N5M1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATPAF2Q8N5M1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ATPAF2Q8N5M1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
ATPAF2Q8N5M1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
ATPAF2Q8N5M1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 AC007613.1-201ENST00000572811 2597 ntBASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.64■□□□□ 0.57
ATPAF2Q8N5M1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 HLA-F-220ENST00000434407 884 ntBASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 AC024563.2-201ENST00000603282 481 ntBASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF2Q8N5M1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms