Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SGO1Q5FBB7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SGO1Q5FBB7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.71■□□□□ 0.43
SGO1Q5FBB7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SGO1Q5FBB7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.71■□□□□ 0.43
SGO1Q5FBB7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.71■□□□□ 0.43
SGO1Q5FBB7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.71■□□□□ 0.43
SGO1Q5FBB7 MIR4497-201ENST00000583208 89 ntBASIC17.71■□□□□ 0.43
SGO1Q5FBB7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.71■□□□□ 0.43
SGO1Q5FBB7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SGO1Q5FBB7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SGO1Q5FBB7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SGO1Q5FBB7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SGO1Q5FBB7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SGO1Q5FBB7 AL096828.2-201ENST00000567259 1965 ntBASIC17.71■□□□□ 0.43
SGO1Q5FBB7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SGO1Q5FBB7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.71■□□□□ 0.43
SGO1Q5FBB7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SGO1Q5FBB7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SGO1Q5FBB7 SDHAP2-201ENST00000455183 2001 ntBASIC17.71■□□□□ 0.42
SGO1Q5FBB7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 AC138028.4-201ENST00000564984 1845 ntBASIC17.7■□□□□ 0.42
SGO1Q5FBB7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 AC008764.6-201ENST00000595909 2069 ntBASIC17.7■□□□□ 0.42
SGO1Q5FBB7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 PHGDH-209ENST00000641074 1780 ntBASIC17.7■□□□□ 0.42
SGO1Q5FBB7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
SGO1Q5FBB7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 AC009102.3-201ENST00000623118 1491 ntBASIC17.69■□□□□ 0.42
SGO1Q5FBB7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
SGO1Q5FBB7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SGO1Q5FBB7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SGO1Q5FBB7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SGO1Q5FBB7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SGO1Q5FBB7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SGO1Q5FBB7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SGO1Q5FBB7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SGO1Q5FBB7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.68■□□□□ 0.42
SGO1Q5FBB7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.68■□□□□ 0.42
SGO1Q5FBB7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.68■□□□□ 0.42
SGO1Q5FBB7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SGO1Q5FBB7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SGO1Q5FBB7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SGO1Q5FBB7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms