Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL20P78556 HYMAI-201ENST00000635591 3347 ntBASIC14.34□□□□□ -0.11
CCL20P78556 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL20P78556 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL20P78556 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL20P78556 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL20P78556 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL20P78556 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.34□□□□□ -0.11
CCL20P78556 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL20P78556 RER1-204ENST00000378518 522 ntTSL 3 BASIC14.34□□□□□ -0.11
CCL20P78556 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CCL20P78556 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.34□□□□□ -0.11
CCL20P78556 CYP2T1P-201ENST00000432607 1285 ntBASIC14.34□□□□□ -0.11
CCL20P78556 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.34□□□□□ -0.11
CCL20P78556 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CCL20P78556 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.34□□□□□ -0.11
CCL20P78556 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL20P78556 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCL20P78556 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL20P78556 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL20P78556 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCL20P78556 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL20P78556 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL20P78556 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL20P78556 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL20P78556 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL20P78556 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL20P78556 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL20P78556 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCL20P78556 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL20P78556 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCL20P78556 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL20P78556 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL20P78556 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL20P78556 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL20P78556 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL20P78556 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCL20P78556 AC068418.2-201ENST00000577309 3703 ntBASIC14.33□□□□□ -0.11
CCL20P78556 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCL20P78556 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
CCL20P78556 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CCL20P78556 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
CCL20P78556 AC103702.1-201ENST00000548801 2630 ntBASIC14.33□□□□□ -0.11
CCL20P78556 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.33□□□□□ -0.11
CCL20P78556 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCL20P78556 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
CCL20P78556 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
CCL20P78556 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CCL20P78556 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL20P78556 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CCL20P78556 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL20P78556 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL20P78556 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL20P78556 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCL20P78556 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL20P78556 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.33□□□□□ -0.12
CCL20P78556 AL160286.2-201ENST00000567150 934 ntBASIC14.33□□□□□ -0.12
CCL20P78556 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL20P78556 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL20P78556 AC006557.6-201ENST00000623071 864 ntBASIC14.33□□□□□ -0.12
CCL20P78556 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL20P78556 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL20P78556 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL20P78556 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCL20P78556 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL20P78556 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL20P78556 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL20P78556 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCL20P78556 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CCL20P78556 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CCL20P78556 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL20P78556 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.33□□□□□ -0.12
CCL20P78556 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CCL20P78556 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCL20P78556 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.32□□□□□ -0.12
CCL20P78556 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CCL20P78556 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CCL20P78556 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCL20P78556 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.32□□□□□ -0.12
CCL20P78556 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
CCL20P78556 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCL20P78556 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL20P78556 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CCL20P78556 PEMT-206ENST00000435340 960 ntTSL 5 BASIC14.32□□□□□ -0.12
CCL20P78556 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCL20P78556 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC14.32□□□□□ -0.12
CCL20P78556 AC008694.1-202ENST00000636953 945 ntBASIC14.32□□□□□ -0.12
CCL20P78556 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL20P78556 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL20P78556 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL20P78556 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL20P78556 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCL20P78556 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL20P78556 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL20P78556 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CCL20P78556 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCL20P78556 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.32□□□□□ -0.12
CCL20P78556 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.32□□□□□ -0.12
CCL20P78556 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.32□□□□□ -0.12
CCL20P78556 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms