Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CR1P49238 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CR1P49238 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CR1P49238 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CR1P49238 AL096828.2-201ENST00000567259 1965 ntBASIC16.01■□□□□ 0.15
CX3CR1P49238 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CR1P49238 TSPY14P-201ENST00000303979 915 ntBASIC16.01■□□□□ 0.15
CX3CR1P49238 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
CX3CR1P49238 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CR1P49238 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CR1P49238 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CR1P49238 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.01■□□□□ 0.15
CX3CR1P49238 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.01■□□□□ 0.15
CX3CR1P49238 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.01■□□□□ 0.15
CX3CR1P49238 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CX3CR1P49238 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CR1P49238 AC010653.2-201ENST00000623505 997 ntBASIC16.01■□□□□ 0.15
CX3CR1P49238 AC112497.1-201ENST00000624824 639 ntBASIC16.01■□□□□ 0.15
CX3CR1P49238 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.01■□□□□ 0.15
CX3CR1P49238 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CX3CR1P49238 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CR1P49238 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.01■□□□□ 0.15
CX3CR1P49238 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.01■□□□□ 0.15
CX3CR1P49238 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.01■□□□□ 0.15
CX3CR1P49238 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.01■□□□□ 0.15
CX3CR1P49238 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.01■□□□□ 0.15
CX3CR1P49238 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CX3CR1P49238 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CX3CR1P49238 PHGDH-209ENST00000641074 1780 ntBASIC16■□□□□ 0.15
CX3CR1P49238 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CX3CR1P49238 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16■□□□□ 0.15
CX3CR1P49238 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CX3CR1P49238 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16■□□□□ 0.15
CX3CR1P49238 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CX3CR1P49238 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16■□□□□ 0.15
CX3CR1P49238 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16■□□□□ 0.15
CX3CR1P49238 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16■□□□□ 0.15
CX3CR1P49238 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CX3CR1P49238 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16■□□□□ 0.15
CX3CR1P49238 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16■□□□□ 0.15
CX3CR1P49238 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CX3CR1P49238 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CX3CR1P49238 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16■□□□□ 0.15
CX3CR1P49238 EGLN1P1-201ENST00000531623 762 ntBASIC16■□□□□ 0.15
CX3CR1P49238 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16■□□□□ 0.15
CX3CR1P49238 AC009065.1-201ENST00000564055 1225 ntBASIC16■□□□□ 0.15
CX3CR1P49238 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CX3CR1P49238 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16■□□□□ 0.15
CX3CR1P49238 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16■□□□□ 0.15
CX3CR1P49238 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CX3CR1P49238 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CX3CR1P49238 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CX3CR1P49238 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CX3CR1P49238 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16■□□□□ 0.15
CX3CR1P49238 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16■□□□□ 0.15
CX3CR1P49238 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CX3CR1P49238 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CX3CR1P49238 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CX3CR1P49238 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CX3CR1P49238 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CX3CR1P49238 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CX3CR1P49238 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CX3CR1P49238 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CX3CR1P49238 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.99■□□□□ 0.15
CX3CR1P49238 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CX3CR1P49238 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.99■□□□□ 0.15
CX3CR1P49238 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.99■□□□□ 0.15
CX3CR1P49238 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CX3CR1P49238 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CX3CR1P49238 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CX3CR1P49238 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CX3CR1P49238 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CX3CR1P49238 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CX3CR1P49238 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CX3CR1P49238 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CX3CR1P49238 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CX3CR1P49238 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CX3CR1P49238 AC128688.1-201ENST00000487626 519 ntBASIC15.99■□□□□ 0.15
CX3CR1P49238 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CX3CR1P49238 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.99■□□□□ 0.15
CX3CR1P49238 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.99■□□□□ 0.15
CX3CR1P49238 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CX3CR1P49238 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.99■□□□□ 0.15
CX3CR1P49238 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.99■□□□□ 0.15
CX3CR1P49238 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CX3CR1P49238 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.99■□□□□ 0.15
CX3CR1P49238 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CX3CR1P49238 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CX3CR1P49238 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CX3CR1P49238 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.99■□□□□ 0.15
CX3CR1P49238 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CX3CR1P49238 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
CX3CR1P49238 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CX3CR1P49238 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.99■□□□□ 0.15
CX3CR1P49238 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.98■□□□□ 0.15
CX3CR1P49238 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CX3CR1P49238 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CX3CR1P49238 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.98■□□□□ 0.15
CX3CR1P49238 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.98■□□□□ 0.15
CX3CR1P49238 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms