Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SLC1A3P43003 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SLC1A3P43003 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SLC1A3P43003 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A3P43003 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC1A3P43003 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC1A3P43003 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A3P43003 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A3P43003 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC1A3P43003 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A3P43003 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SLC1A3P43003 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A3P43003 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A3P43003 GNAS-203ENST00000306120 1878 ntBASIC16.74■□□□□ 0.27
SLC1A3P43003 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC1A3P43003 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A3P43003 GMCL1P1-201ENST00000463439 1581 ntBASIC16.74■□□□□ 0.27
SLC1A3P43003 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A3P43003 HTR7P1-202ENST00000624664 4411 ntBASIC16.74■□□□□ 0.27
SLC1A3P43003 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.74■□□□□ 0.27
SLC1A3P43003 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC1A3P43003 AP000523.1-201ENST00000398242 1049 ntBASIC16.74■□□□□ 0.27
SLC1A3P43003 ECEL1P3-201ENST00000427961 737 ntBASIC16.74■□□□□ 0.27
SLC1A3P43003 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SLC1A3P43003 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A3P43003 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC1A3P43003 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC1A3P43003 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC1A3P43003 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC1A3P43003 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC1A3P43003 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SLC1A3P43003 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC1A3P43003 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SLC1A3P43003 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A3P43003 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A3P43003 AC134043.2-201ENST00000624206 2238 ntBASIC16.74■□□□□ 0.27
SLC1A3P43003 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A3P43003 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A3P43003 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC1A3P43003 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A3P43003 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC1A3P43003 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC1A3P43003 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A3P43003 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A3P43003 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A3P43003 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A3P43003 SDHAP2-201ENST00000455183 2001 ntBASIC16.74■□□□□ 0.27
SLC1A3P43003 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A3P43003 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SLC1A3P43003 LINC00896-202ENST00000609602 2128 ntBASIC16.73■□□□□ 0.27
SLC1A3P43003 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SLC1A3P43003 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A3P43003 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A3P43003 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SLC1A3P43003 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A3P43003 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A3P43003 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC1A3P43003 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A3P43003 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A3P43003 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC1A3P43003 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC1A3P43003 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC1A3P43003 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
SLC1A3P43003 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SLC1A3P43003 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SLC1A3P43003 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A3P43003 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A3P43003 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.73■□□□□ 0.27
SLC1A3P43003 AC093677.2-201ENST00000600169 1863 ntBASIC16.73■□□□□ 0.27
SLC1A3P43003 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A3P43003 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A3P43003 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A3P43003 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A3P43003 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A3P43003 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SLC1A3P43003 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A3P43003 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A3P43003 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A3P43003 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SLC1A3P43003 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A3P43003 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SLC1A3P43003 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC1A3P43003 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A3P43003 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A3P43003 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
SLC1A3P43003 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC1A3P43003 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A3P43003 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SLC1A3P43003 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A3P43003 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A3P43003 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A3P43003 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC1A3P43003 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A3P43003 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.72■□□□□ 0.27
SLC1A3P43003 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SLC1A3P43003 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC1A3P43003 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.72■□□□□ 0.27
SLC1A3P43003 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SLC1A3P43003 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.72■□□□□ 0.27
SLC1A3P43003 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms