Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HNRNPCL4P0DMR1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HNRNPCL4P0DMR1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HNRNPCL4P0DMR1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HNRNPCL4P0DMR1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HNRNPCL4P0DMR1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HNRNPCL4P0DMR1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HNRNPCL4P0DMR1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HNRNPCL4P0DMR1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
HNRNPCL4P0DMR1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.93■□□□□ 0.3
HNRNPCL4P0DMR1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 LINC01126-201ENST00000623515 1646 ntBASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HNRNPCL4P0DMR1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 AP000997.3-201ENST00000623333 2250 ntBASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 AL512604.3-201ENST00000569583 964 ntBASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 MIR4497-201ENST00000583208 89 ntBASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.91■□□□□ 0.3
HNRNPCL4P0DMR1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 AC010240.3-201ENST00000607688 395 ntBASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms