Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL5A2P05997 AC092865.6-201ENST00000642101 219 ntBASIC23.82■■□□□ 1.4
COL5A2P05997 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
COL5A2P05997 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC23.82■■□□□ 1.4
COL5A2P05997 AC097374.2-201ENST00000618617 1306 ntBASIC23.82■■□□□ 1.4
COL5A2P05997 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC23.82■■□□□ 1.4
COL5A2P05997 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL5A2P05997 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL5A2P05997 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC23.82■■□□□ 1.4
COL5A2P05997 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC23.82■■□□□ 1.4
COL5A2P05997 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC23.82■■□□□ 1.4
COL5A2P05997 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL5A2P05997 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL5A2P05997 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.82■■□□□ 1.4
COL5A2P05997 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL5A2P05997 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC23.81■■□□□ 1.4
COL5A2P05997 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL5A2P05997 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL5A2P05997 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC23.81■■□□□ 1.4
COL5A2P05997 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL5A2P05997 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC23.81■■□□□ 1.4
COL5A2P05997 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
COL5A2P05997 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC23.81■■□□□ 1.4
COL5A2P05997 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL5A2P05997 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL5A2P05997 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL5A2P05997 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
COL5A2P05997 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
COL5A2P05997 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
COL5A2P05997 AC007952.6-201ENST00000573168 2673 ntBASIC23.81■■□□□ 1.4
COL5A2P05997 AC003957.1-201ENST00000625108 2673 ntBASIC23.81■■□□□ 1.4
COL5A2P05997 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL5A2P05997 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL5A2P05997 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL5A2P05997 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL5A2P05997 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
COL5A2P05997 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC23.81■■□□□ 1.4
COL5A2P05997 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL5A2P05997 USP39-202ENST00000409025 1946 ntTSL 5 BASIC23.81■■□□□ 1.4
COL5A2P05997 AC096633.1-201ENST00000422446 749 ntBASIC23.81■■□□□ 1.4
COL5A2P05997 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL5A2P05997 PRYP5-201ENST00000451909 266 ntBASIC23.81■■□□□ 1.4
COL5A2P05997 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC23.81■■□□□ 1.4
COL5A2P05997 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL5A2P05997 AC122714.2-201ENST00000502787 707 ntBASIC23.81■■□□□ 1.4
COL5A2P05997 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC23.81■■□□□ 1.4
COL5A2P05997 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC23.81■■□□□ 1.4
COL5A2P05997 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC23.81■■□□□ 1.4
COL5A2P05997 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC23.81■■□□□ 1.4
COL5A2P05997 TCAP-202ENST00000578283 583 ntTSL 5 BASIC23.81■■□□□ 1.4
COL5A2P05997 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC23.81■■□□□ 1.4
COL5A2P05997 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL5A2P05997 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL5A2P05997 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL5A2P05997 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL5A2P05997 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL5A2P05997 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC23.8■■□□□ 1.4
COL5A2P05997 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
COL5A2P05997 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL5A2P05997 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL5A2P05997 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
COL5A2P05997 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL5A2P05997 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL5A2P05997 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL5A2P05997 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
COL5A2P05997 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC23.8■■□□□ 1.4
COL5A2P05997 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC23.8■■□□□ 1.4
COL5A2P05997 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC23.8■■□□□ 1.4
COL5A2P05997 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC23.8■■□□□ 1.4
COL5A2P05997 AC108073.2-201ENST00000464002 357 ntBASIC23.8■■□□□ 1.4
COL5A2P05997 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC23.8■■□□□ 1.4
COL5A2P05997 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC23.8■■□□□ 1.4
COL5A2P05997 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC23.8■■□□□ 1.4
COL5A2P05997 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC23.8■■□□□ 1.4
COL5A2P05997 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC23.8■■□□□ 1.4
COL5A2P05997 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC23.8■■□□□ 1.4
COL5A2P05997 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC23.8■■□□□ 1.4
COL5A2P05997 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL5A2P05997 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL5A2P05997 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
COL5A2P05997 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
COL5A2P05997 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
COL5A2P05997 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL5A2P05997 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL5A2P05997 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL5A2P05997 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC23.79■■□□□ 1.4
COL5A2P05997 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC23.79■■□□□ 1.4
COL5A2P05997 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL5A2P05997 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL5A2P05997 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL5A2P05997 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL5A2P05997 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC23.79■■□□□ 1.4
COL5A2P05997 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL5A2P05997 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL5A2P05997 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL5A2P05997 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
COL5A2P05997 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC23.78■■□□□ 1.4
COL5A2P05997 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
COL5A2P05997 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL5A2P05997 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms