Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR3DP05423 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
POLR3DP05423 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR3DP05423 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR3DP05423 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
POLR3DP05423 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR3DP05423 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR3DP05423 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.72■■□□□ 1.07
POLR3DP05423 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR3DP05423 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR3DP05423 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.72■■□□□ 1.07
POLR3DP05423 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.72■■□□□ 1.07
POLR3DP05423 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.72■■□□□ 1.07
POLR3DP05423 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.72■■□□□ 1.07
POLR3DP05423 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR3DP05423 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.72■■□□□ 1.07
POLR3DP05423 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR3DP05423 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
POLR3DP05423 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.71■■□□□ 1.07
POLR3DP05423 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
POLR3DP05423 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.71■■□□□ 1.07
POLR3DP05423 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
POLR3DP05423 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
POLR3DP05423 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.71■■□□□ 1.07
POLR3DP05423 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
POLR3DP05423 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
POLR3DP05423 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
POLR3DP05423 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
POLR3DP05423 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
POLR3DP05423 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.71■■□□□ 1.07
POLR3DP05423 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.71■■□□□ 1.07
POLR3DP05423 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
POLR3DP05423 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.71■■□□□ 1.07
POLR3DP05423 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
POLR3DP05423 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
POLR3DP05423 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
POLR3DP05423 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
POLR3DP05423 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
POLR3DP05423 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
POLR3DP05423 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.71■■□□□ 1.07
POLR3DP05423 AC007613.1-201ENST00000572811 2597 ntBASIC21.71■■□□□ 1.07
POLR3DP05423 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
POLR3DP05423 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.7■■□□□ 1.07
POLR3DP05423 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
POLR3DP05423 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
POLR3DP05423 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
POLR3DP05423 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.7■■□□□ 1.06
POLR3DP05423 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
POLR3DP05423 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
POLR3DP05423 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
POLR3DP05423 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
POLR3DP05423 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
POLR3DP05423 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.7■■□□□ 1.06
POLR3DP05423 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
POLR3DP05423 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.7■■□□□ 1.06
POLR3DP05423 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.7■■□□□ 1.06
POLR3DP05423 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.7■■□□□ 1.06
POLR3DP05423 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.7■■□□□ 1.06
POLR3DP05423 AC008687.5-201ENST00000593746 558 ntBASIC21.7■■□□□ 1.06
POLR3DP05423 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.7■■□□□ 1.06
POLR3DP05423 AL592071.1-201ENST00000611956 408 ntBASIC21.7■■□□□ 1.06
POLR3DP05423 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.7■■□□□ 1.06
POLR3DP05423 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
POLR3DP05423 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
POLR3DP05423 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
POLR3DP05423 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
POLR3DP05423 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
POLR3DP05423 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
POLR3DP05423 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
POLR3DP05423 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.7■■□□□ 1.06
POLR3DP05423 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
POLR3DP05423 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
POLR3DP05423 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR3DP05423 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.69■■□□□ 1.06
POLR3DP05423 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.69■■□□□ 1.06
POLR3DP05423 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR3DP05423 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR3DP05423 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.69■■□□□ 1.06
POLR3DP05423 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR3DP05423 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR3DP05423 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.69■■□□□ 1.06
POLR3DP05423 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR3DP05423 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR3DP05423 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR3DP05423 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
POLR3DP05423 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
POLR3DP05423 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.69■■□□□ 1.06
POLR3DP05423 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR3DP05423 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
POLR3DP05423 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR3DP05423 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
POLR3DP05423 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR3DP05423 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
POLR3DP05423 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR3DP05423 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.69■■□□□ 1.06
POLR3DP05423 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
POLR3DP05423 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
POLR3DP05423 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
POLR3DP05423 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
POLR3DP05423 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms