Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.06■□□□□ 0.64
TRUB2O95900 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB2O95900 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB2O95900 MIR662-201ENST00000384847 95 ntBASIC19.06■□□□□ 0.64
TRUB2O95900 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB2O95900 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB2O95900 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.06■□□□□ 0.64
TRUB2O95900 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.06■□□□□ 0.64
TRUB2O95900 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.06■□□□□ 0.64
TRUB2O95900 AL136038.3-201ENST00000561909 1096 ntBASIC19.06■□□□□ 0.64
TRUB2O95900 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.06■□□□□ 0.64
TRUB2O95900 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.06■□□□□ 0.64
TRUB2O95900 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRUB2O95900 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
TRUB2O95900 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.06■□□□□ 0.64
TRUB2O95900 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB2O95900 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.06■□□□□ 0.64
TRUB2O95900 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB2O95900 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.06■□□□□ 0.64
TRUB2O95900 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB2O95900 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB2O95900 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.06■□□□□ 0.64
TRUB2O95900 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB2O95900 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB2O95900 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB2O95900 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB2O95900 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB2O95900 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB2O95900 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRUB2O95900 AL133373.2-201ENST00000623187 2828 ntBASIC19.06■□□□□ 0.64
TRUB2O95900 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.05■□□□□ 0.64
TRUB2O95900 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRUB2O95900 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRUB2O95900 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRUB2O95900 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRUB2O95900 AC138028.4-201ENST00000564984 1845 ntBASIC19.05■□□□□ 0.64
TRUB2O95900 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TRUB2O95900 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRUB2O95900 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TRUB2O95900 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRUB2O95900 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRUB2O95900 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.05■□□□□ 0.64
TRUB2O95900 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.05■□□□□ 0.64
TRUB2O95900 FAM86EP-206ENST00000510506 987 ntBASIC19.05■□□□□ 0.64
TRUB2O95900 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.05■□□□□ 0.64
TRUB2O95900 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.05■□□□□ 0.64
TRUB2O95900 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.05■□□□□ 0.64
TRUB2O95900 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.05■□□□□ 0.64
TRUB2O95900 AC024563.2-201ENST00000603282 481 ntBASIC19.05■□□□□ 0.64
TRUB2O95900 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRUB2O95900 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRUB2O95900 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRUB2O95900 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
TRUB2O95900 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.05■□□□□ 0.64
TRUB2O95900 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB2O95900 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.04■□□□□ 0.64
TRUB2O95900 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.04■□□□□ 0.64
TRUB2O95900 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB2O95900 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.04■□□□□ 0.64
TRUB2O95900 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB2O95900 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB2O95900 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB2O95900 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB2O95900 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB2O95900 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB2O95900 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB2O95900 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB2O95900 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB2O95900 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB2O95900 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRUB2O95900 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TRUB2O95900 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRUB2O95900 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.04■□□□□ 0.64
TRUB2O95900 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB2O95900 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB2O95900 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.04■□□□□ 0.64
TRUB2O95900 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.04■□□□□ 0.64
TRUB2O95900 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.04■□□□□ 0.64
TRUB2O95900 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.04■□□□□ 0.64
TRUB2O95900 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB2O95900 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB2O95900 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.04■□□□□ 0.64
TRUB2O95900 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB2O95900 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB2O95900 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB2O95900 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.04■□□□□ 0.64
TRUB2O95900 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB2O95900 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB2O95900 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB2O95900 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRUB2O95900 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.04■□□□□ 0.64
TRUB2O95900 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
TRUB2O95900 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB2O95900 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.03■□□□□ 0.64
TRUB2O95900 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB2O95900 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.03■□□□□ 0.64
TRUB2O95900 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB2O95900 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.03■□□□□ 0.64
TRUB2O95900 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRUB2O95900 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms