Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HCN1O60741 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HCN1O60741 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HCN1O60741 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HCN1O60741 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.03■□□□□ 0.32
HCN1O60741 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HCN1O60741 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HCN1O60741 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.03■□□□□ 0.32
HCN1O60741 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HCN1O60741 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HCN1O60741 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HCN1O60741 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HCN1O60741 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
HCN1O60741 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
HCN1O60741 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HCN1O60741 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.02■□□□□ 0.32
HCN1O60741 AC126763.1-201ENST00000552015 2118 ntBASIC17.02■□□□□ 0.32
HCN1O60741 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HCN1O60741 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HCN1O60741 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.02■□□□□ 0.32
HCN1O60741 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.02■□□□□ 0.32
HCN1O60741 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HCN1O60741 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.02■□□□□ 0.32
HCN1O60741 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.02■□□□□ 0.32
HCN1O60741 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.02■□□□□ 0.32
HCN1O60741 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HCN1O60741 AL031133.1-201ENST00000406807 723 ntBASIC17.02■□□□□ 0.32
HCN1O60741 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HCN1O60741 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.02■□□□□ 0.32
HCN1O60741 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.02■□□□□ 0.32
HCN1O60741 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.02■□□□□ 0.32
HCN1O60741 AC068587.9-201ENST00000641814 219 ntBASIC17.02■□□□□ 0.32
HCN1O60741 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HCN1O60741 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HCN1O60741 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
HCN1O60741 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.02■□□□□ 0.32
HCN1O60741 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
HCN1O60741 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HCN1O60741 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HCN1O60741 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
HCN1O60741 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HCN1O60741 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HCN1O60741 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
HCN1O60741 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.02■□□□□ 0.31
HCN1O60741 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HCN1O60741 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HCN1O60741 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HCN1O60741 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HCN1O60741 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.01■□□□□ 0.31
HCN1O60741 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.01■□□□□ 0.31
HCN1O60741 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HCN1O60741 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HCN1O60741 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
HCN1O60741 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HCN1O60741 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HCN1O60741 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HCN1O60741 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
HCN1O60741 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HCN1O60741 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.01■□□□□ 0.31
HCN1O60741 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCN1O60741 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCN1O60741 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HCN1O60741 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCN1O60741 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HCN1O60741 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.01■□□□□ 0.31
HCN1O60741 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCN1O60741 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
HCN1O60741 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HCN1O60741 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HCN1O60741 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HCN1O60741 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCN1O60741 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HCN1O60741 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HCN1O60741 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.01■□□□□ 0.31
HCN1O60741 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HCN1O60741 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HCN1O60741 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCN1O60741 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCN1O60741 MCCD1P1-208ENST00000445732 328 ntBASIC17.01■□□□□ 0.31
HCN1O60741 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.01■□□□□ 0.31
HCN1O60741 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HCN1O60741 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.01■□□□□ 0.31
HCN1O60741 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
HCN1O60741 AL121956.5-201ENST00000625261 221 ntBASIC17.01■□□□□ 0.31
HCN1O60741 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HCN1O60741 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCN1O60741 GPAT2P1-201ENST00000444924 1672 ntBASIC17.01■□□□□ 0.31
HCN1O60741 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HCN1O60741 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HCN1O60741 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HCN1O60741 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17■□□□□ 0.31
HCN1O60741 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17■□□□□ 0.31
HCN1O60741 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
HCN1O60741 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HCN1O60741 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HCN1O60741 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
HCN1O60741 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HCN1O60741 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HCN1O60741 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17■□□□□ 0.31
HCN1O60741 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms