Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 RPSAP43-201ENST00000402237 625 ntBASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 GPX1P2-201ENST00000429271 606 ntBASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.99■□□□□ 0.63
HCFC2Q9Y5Z7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 NKAPP1-205ENST00000585790 367 ntBASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.98■□□□□ 0.63
HCFC2Q9Y5Z7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 MTDHP4-201ENST00000600287 670 ntBASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 AC107918.4-202ENST00000641623 219 ntBASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC2Q9Y5Z7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HCFC2Q9Y5Z7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HCFC2Q9Y5Z7 AL499627.1-201ENST00000569373 2188 ntBASIC18.96■□□□□ 0.63
HCFC2Q9Y5Z7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HCFC2Q9Y5Z7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.96■□□□□ 0.63
HCFC2Q9Y5Z7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.96■□□□□ 0.63
HCFC2Q9Y5Z7 YBX2P1-201ENST00000394192 760 ntBASIC18.96■□□□□ 0.63
HCFC2Q9Y5Z7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HCFC2Q9Y5Z7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.96■□□□□ 0.63
HCFC2Q9Y5Z7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.96■□□□□ 0.63
HCFC2Q9Y5Z7 AC105339.3-201ENST00000560043 636 ntBASIC18.96■□□□□ 0.63
HCFC2Q9Y5Z7 AC040169.1-201ENST00000565382 521 ntBASIC18.96■□□□□ 0.63
HCFC2Q9Y5Z7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.96■□□□□ 0.63
HCFC2Q9Y5Z7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HCFC2Q9Y5Z7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.96■□□□□ 0.63
HCFC2Q9Y5Z7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HCFC2Q9Y5Z7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HCFC2Q9Y5Z7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
HCFC2Q9Y5Z7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
HCFC2Q9Y5Z7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.96■□□□□ 0.63
HCFC2Q9Y5Z7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HCFC2Q9Y5Z7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC2Q9Y5Z7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.95■□□□□ 0.62
HCFC2Q9Y5Z7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms