Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPBQ9H078 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPBQ9H078 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPBQ9H078 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPBQ9H078 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPBQ9H078 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CLPBQ9H078 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPBQ9H078 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLPBQ9H078 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPBQ9H078 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.32■□□□□ 0.52
CLPBQ9H078 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CLPBQ9H078 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLPBQ9H078 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CLPBQ9H078 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPBQ9H078 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPBQ9H078 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.32■□□□□ 0.52
CLPBQ9H078 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.32■□□□□ 0.52
CLPBQ9H078 AL645929.1-201ENST00000420084 975 ntBASIC18.32■□□□□ 0.52
CLPBQ9H078 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLPBQ9H078 KRT18P48-201ENST00000434763 852 ntBASIC18.32■□□□□ 0.52
CLPBQ9H078 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.32■□□□□ 0.52
CLPBQ9H078 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CLPBQ9H078 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.32■□□□□ 0.52
CLPBQ9H078 AL157888.1-201ENST00000631930 593 ntBASIC18.32■□□□□ 0.52
CLPBQ9H078 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPBQ9H078 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPBQ9H078 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.32■□□□□ 0.52
CLPBQ9H078 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.32■□□□□ 0.52
CLPBQ9H078 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.32■□□□□ 0.52
CLPBQ9H078 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.32■□□□□ 0.52
CLPBQ9H078 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPBQ9H078 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.32■□□□□ 0.52
CLPBQ9H078 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.32■□□□□ 0.52
CLPBQ9H078 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLPBQ9H078 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CLPBQ9H078 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLPBQ9H078 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.31■□□□□ 0.52
CLPBQ9H078 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLPBQ9H078 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLPBQ9H078 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.31■□□□□ 0.52
CLPBQ9H078 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.31■□□□□ 0.52
CLPBQ9H078 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLPBQ9H078 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLPBQ9H078 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLPBQ9H078 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.31■□□□□ 0.52
CLPBQ9H078 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.31■□□□□ 0.52
CLPBQ9H078 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.31■□□□□ 0.52
CLPBQ9H078 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLPBQ9H078 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLPBQ9H078 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CLPBQ9H078 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.31■□□□□ 0.52
CLPBQ9H078 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.31■□□□□ 0.52
CLPBQ9H078 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CLPBQ9H078 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.31■□□□□ 0.52
CLPBQ9H078 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLPBQ9H078 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.31■□□□□ 0.52
CLPBQ9H078 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
CLPBQ9H078 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CLPBQ9H078 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLPBQ9H078 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLPBQ9H078 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.31■□□□□ 0.52
CLPBQ9H078 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLPBQ9H078 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLPBQ9H078 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CLPBQ9H078 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLPBQ9H078 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.31■□□□□ 0.52
CLPBQ9H078 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLPBQ9H078 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CLPBQ9H078 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLPBQ9H078 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.3■□□□□ 0.52
CLPBQ9H078 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CLPBQ9H078 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.3■□□□□ 0.52
CLPBQ9H078 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLPBQ9H078 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CLPBQ9H078 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CLPBQ9H078 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLPBQ9H078 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLPBQ9H078 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.3■□□□□ 0.52
CLPBQ9H078 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.3■□□□□ 0.52
CLPBQ9H078 DUSP5P1-201ENST00000441325 1139 ntBASIC18.3■□□□□ 0.52
CLPBQ9H078 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLPBQ9H078 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.3■□□□□ 0.52
CLPBQ9H078 KRT126P-201ENST00000549467 1181 ntBASIC18.3■□□□□ 0.52
CLPBQ9H078 MIR3917-201ENST00000580971 93 ntBASIC18.3■□□□□ 0.52
CLPBQ9H078 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.3■□□□□ 0.52
CLPBQ9H078 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.3■□□□□ 0.52
CLPBQ9H078 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLPBQ9H078 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CLPBQ9H078 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLPBQ9H078 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLPBQ9H078 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLPBQ9H078 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
CLPBQ9H078 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLPBQ9H078 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.3■□□□□ 0.52
CLPBQ9H078 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLPBQ9H078 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.3■□□□□ 0.52
CLPBQ9H078 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.29■□□□□ 0.52
CLPBQ9H078 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPBQ9H078 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPBQ9H078 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms