Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.19■□□□□ 0.98
SDF4Q9BRK5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.19■□□□□ 0.98
SDF4Q9BRK5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SDF4Q9BRK5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.19■□□□□ 0.98
SDF4Q9BRK5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SDF4Q9BRK5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.19■□□□□ 0.98
SDF4Q9BRK5 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SDF4Q9BRK5 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SDF4Q9BRK5 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SDF4Q9BRK5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SDF4Q9BRK5 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SDF4Q9BRK5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.19■□□□□ 0.98
SDF4Q9BRK5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC21.19■□□□□ 0.98
SDF4Q9BRK5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SDF4Q9BRK5 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SDF4Q9BRK5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SDF4Q9BRK5 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SDF4Q9BRK5 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.19■□□□□ 0.98
SDF4Q9BRK5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
SDF4Q9BRK5 RCC2P3-201ENST00000418112 1537 ntBASIC21.19■□□□□ 0.98
SDF4Q9BRK5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SDF4Q9BRK5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SDF4Q9BRK5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SDF4Q9BRK5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.18■□□□□ 0.98
SDF4Q9BRK5 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 KRT8P32-201ENST00000512863 1461 ntBASIC21.18■□□□□ 0.98
SDF4Q9BRK5 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDF4Q9BRK5 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.17■□□□□ 0.98
SDF4Q9BRK5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDF4Q9BRK5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDF4Q9BRK5 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDF4Q9BRK5 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDF4Q9BRK5 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDF4Q9BRK5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
SDF4Q9BRK5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SDF4Q9BRK5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDF4Q9BRK5 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.17■□□□□ 0.98
SDF4Q9BRK5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.17■□□□□ 0.98
SDF4Q9BRK5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDF4Q9BRK5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
SDF4Q9BRK5 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SDF4Q9BRK5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SDF4Q9BRK5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDF4Q9BRK5 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDF4Q9BRK5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDF4Q9BRK5 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.17■□□□□ 0.98
SDF4Q9BRK5 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
SDF4Q9BRK5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.17■□□□□ 0.98
SDF4Q9BRK5 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 AL109659.2-201ENST00000606809 1674 ntBASIC21.16■□□□□ 0.98
SDF4Q9BRK5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 AL359075.1-203ENST00000462729 1002 ntBASIC21.16■□□□□ 0.98
SDF4Q9BRK5 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 GCSHP2-201ENST00000560971 527 ntBASIC21.16■□□□□ 0.98
SDF4Q9BRK5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
SDF4Q9BRK5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms