Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC12.13□□□□□ -0.47
LITAFQ99732 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC12.13□□□□□ -0.47
LITAFQ99732 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LITAFQ99732 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
LITAFQ99732 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC12.13□□□□□ -0.47
LITAFQ99732 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LITAFQ99732 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
LITAFQ99732 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
LITAFQ99732 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.13□□□□□ -0.47
LITAFQ99732 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LITAFQ99732 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
LITAFQ99732 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 AL603756.1-201ENST00000606511 2163 ntBASIC12.12□□□□□ -0.47
LITAFQ99732 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 PGR-209ENST00000617858 2816 ntTSL 5 BASIC12.12□□□□□ -0.47
LITAFQ99732 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
LITAFQ99732 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LITAFQ99732 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC12.12□□□□□ -0.47
LITAFQ99732 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC12.12□□□□□ -0.47
LITAFQ99732 AP000593.1-201ENST00000393668 712 ntBASIC12.12□□□□□ -0.47
LITAFQ99732 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LITAFQ99732 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC12.12□□□□□ -0.47
LITAFQ99732 NALT1-201ENST00000429224 738 ntTSL 5 BASIC12.12□□□□□ -0.47
LITAFQ99732 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC12.12□□□□□ -0.47
LITAFQ99732 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC12.12□□□□□ -0.47
LITAFQ99732 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
LITAFQ99732 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 WWOX-218ENST00000627394 894 ntTSL 5 BASIC12.12□□□□□ -0.47
LITAFQ99732 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC12.12□□□□□ -0.47
LITAFQ99732 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LITAFQ99732 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC12.12□□□□□ -0.47
LITAFQ99732 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.12□□□□□ -0.47
LITAFQ99732 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LITAFQ99732 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
LITAFQ99732 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LITAFQ99732 KRT8P11-201ENST00000409686 1436 ntBASIC12.11□□□□□ -0.47
LITAFQ99732 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC12.11□□□□□ -0.47
LITAFQ99732 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC12.11□□□□□ -0.47
LITAFQ99732 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LITAFQ99732 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC12.11□□□□□ -0.47
LITAFQ99732 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LITAFQ99732 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12.11□□□□□ -0.47
LITAFQ99732 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LITAFQ99732 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LITAFQ99732 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LITAFQ99732 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LITAFQ99732 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
LITAFQ99732 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LITAFQ99732 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC12.11□□□□□ -0.47
LITAFQ99732 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LITAFQ99732 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC12.11□□□□□ -0.47
LITAFQ99732 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LITAFQ99732 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LITAFQ99732 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC12.11□□□□□ -0.47
LITAFQ99732 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC12.11□□□□□ -0.47
LITAFQ99732 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LITAFQ99732 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC12.11□□□□□ -0.47
LITAFQ99732 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LITAFQ99732 AC008741.2-201ENST00000612792 3115 ntBASIC12.11□□□□□ -0.47
LITAFQ99732 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LITAFQ99732 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LITAFQ99732 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LITAFQ99732 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LITAFQ99732 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.11□□□□□ -0.47
LITAFQ99732 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
LITAFQ99732 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms