Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 AL158047.1-201ENST00000445918 881 ntBASIC15.36■□□□□ 0.05
CLCC1Q96S66 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCC1Q96S66 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.36■□□□□ 0.05
CLCC1Q96S66 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CLCC1Q96S66 ITM2C-210ENST00000620962 501 ntBASIC15.36■□□□□ 0.05
CLCC1Q96S66 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.36■□□□□ 0.05
CLCC1Q96S66 HLA-A-209ENST00000638375 975 ntBASIC15.36■□□□□ 0.05
CLCC1Q96S66 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCC1Q96S66 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CLCC1Q96S66 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CLCC1Q96S66 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCC1Q96S66 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCC1Q96S66 AL512353.2-201ENST00000448759 1962 ntBASIC15.36■□□□□ 0.05
CLCC1Q96S66 HTR7P1-201ENST00000538670 1336 ntBASIC15.36■□□□□ 0.05
CLCC1Q96S66 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCC1Q96S66 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCC1Q96S66 SIRPAP1-201ENST00000448467 1770 ntBASIC15.36■□□□□ 0.05
CLCC1Q96S66 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCC1Q96S66 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CLCC1Q96S66 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
CLCC1Q96S66 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCC1Q96S66 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CLCC1Q96S66 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCC1Q96S66 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCC1Q96S66 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CLCC1Q96S66 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
CLCC1Q96S66 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCC1Q96S66 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCC1Q96S66 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCC1Q96S66 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCC1Q96S66 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCC1Q96S66 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CLCC1Q96S66 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCC1Q96S66 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCC1Q96S66 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCC1Q96S66 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCC1Q96S66 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCC1Q96S66 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCC1Q96S66 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCC1Q96S66 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCC1Q96S66 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CLCC1Q96S66 AC133681.1-201ENST00000465482 601 ntBASIC15.35■□□□□ 0.05
CLCC1Q96S66 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.35■□□□□ 0.05
CLCC1Q96S66 AC142381.4-202ENST00000563973 229 ntBASIC15.35■□□□□ 0.05
CLCC1Q96S66 AL160286.2-201ENST00000567150 934 ntBASIC15.35■□□□□ 0.05
CLCC1Q96S66 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.35■□□□□ 0.05
CLCC1Q96S66 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CLCC1Q96S66 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCC1Q96S66 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.35■□□□□ 0.05
CLCC1Q96S66 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.35■□□□□ 0.05
CLCC1Q96S66 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCC1Q96S66 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCC1Q96S66 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCC1Q96S66 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCC1Q96S66 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCC1Q96S66 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCC1Q96S66 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCC1Q96S66 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCC1Q96S66 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CLCC1Q96S66 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCC1Q96S66 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCC1Q96S66 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCC1Q96S66 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCC1Q96S66 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCC1Q96S66 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CLCC1Q96S66 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
CLCC1Q96S66 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCC1Q96S66 FEM1AP3-201ENST00000403722 1741 ntBASIC15.34■□□□□ 0.05
CLCC1Q96S66 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CLCC1Q96S66 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCC1Q96S66 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCC1Q96S66 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CLCC1Q96S66 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCC1Q96S66 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCC1Q96S66 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCC1Q96S66 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCC1Q96S66 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCC1Q96S66 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCC1Q96S66 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.34■□□□□ 0.05
CLCC1Q96S66 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CLCC1Q96S66 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCC1Q96S66 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.34■□□□□ 0.05
CLCC1Q96S66 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.34■□□□□ 0.05
CLCC1Q96S66 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCC1Q96S66 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.34■□□□□ 0.05
CLCC1Q96S66 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.34■□□□□ 0.05
CLCC1Q96S66 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.34■□□□□ 0.05
CLCC1Q96S66 AP002982.1-201ENST00000492365 877 ntBASIC15.34■□□□□ 0.05
CLCC1Q96S66 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.34■□□□□ 0.05
CLCC1Q96S66 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.34■□□□□ 0.05
CLCC1Q96S66 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.34■□□□□ 0.05
CLCC1Q96S66 AL359736.2-201ENST00000621992 437 ntBASIC15.34■□□□□ 0.05
CLCC1Q96S66 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCC1Q96S66 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CLCC1Q96S66 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.34■□□□□ 0.05
CLCC1Q96S66 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCC1Q96S66 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCC1Q96S66 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCC1Q96S66 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.34■□□□□ 0.05
CLCC1Q96S66 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms