Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 ABALON-201ENST00000629058 1903 ntBASIC13.78□□□□□ -0.2
AP1S3Q96PC3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 TSPY21P-201ENST00000433481 731 ntBASIC13.78□□□□□ -0.2
AP1S3Q96PC3 NME6-213ENST00000451657 871 ntTSL 2 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
AP1S3Q96PC3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
AP1S3Q96PC3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
AP1S3Q96PC3 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.77□□□□□ -0.2
AP1S3Q96PC3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.77□□□□□ -0.2
AP1S3Q96PC3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.77□□□□□ -0.2
AP1S3Q96PC3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
AP1S3Q96PC3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
AP1S3Q96PC3 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
AP1S3Q96PC3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 KRT18P16-201ENST00000510337 1294 ntBASIC13.77□□□□□ -0.21
AP1S3Q96PC3 AF201337.1-201ENST00000520239 748 ntBASIC13.77□□□□□ -0.21
AP1S3Q96PC3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 AC006557.6-201ENST00000623071 864 ntBASIC13.77□□□□□ -0.21
AP1S3Q96PC3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S3Q96PC3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms