Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPGRIP1Q96KN7 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.09■□□□□ 0.81
RPGRIP1Q96KN7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RPGRIP1Q96KN7 AC092329.2-201ENST00000598402 547 ntBASIC20.09■□□□□ 0.81
RPGRIP1Q96KN7 NPAP1P7-201ENST00000613027 823 ntBASIC20.09■□□□□ 0.81
RPGRIP1Q96KN7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPGRIP1Q96KN7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RPGRIP1Q96KN7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RPGRIP1Q96KN7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RPGRIP1Q96KN7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
RPGRIP1Q96KN7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPGRIP1Q96KN7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RPGRIP1Q96KN7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.09■□□□□ 0.81
RPGRIP1Q96KN7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPGRIP1Q96KN7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 CKBP1-201ENST00000565489 1086 ntBASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.08■□□□□ 0.81
RPGRIP1Q96KN7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPGRIP1Q96KN7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.08■□□□□ 0.8
RPGRIP1Q96KN7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPGRIP1Q96KN7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
RPGRIP1Q96KN7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPGRIP1Q96KN7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPGRIP1Q96KN7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 AC008764.6-201ENST00000595909 2069 ntBASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 AC111152.3-201ENST00000569699 673 ntBASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 GPALPP1-207ENST00000611650 899 ntBASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 KRT8P10-201ENST00000450021 1447 ntBASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.07■□□□□ 0.8
RPGRIP1Q96KN7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 SPDYE15P-201ENST00000424157 909 ntBASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 CR769767.2-201ENST00000622735 460 ntBASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms