Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 CYP2T1P-201ENST00000432607 1285 ntBASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 AC005829.2-201ENST00000571422 1056 ntBASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 AC005181.1-201ENST00000604782 1256 ntBASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 AL121906.2-201ENST00000621597 723 ntBASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 CNN2P6-201ENST00000439038 900 ntBASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 SP2-202ENST00000613139 908 ntTSL 5 BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM11BQ8TCY0 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
SMIM11BQ8TCY0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC11.83□□□□□ -0.51
SMIM11BQ8TCY0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.51
SMIM11BQ8TCY0 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.51
SMIM11BQ8TCY0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.51
SMIM11BQ8TCY0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SMIM11BQ8TCY0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC11.83□□□□□ -0.52
SMIM11BQ8TCY0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms