Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 MIR3180-5-201ENST00000583743 153 ntBASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 NPAP1P7-201ENST00000613027 823 ntBASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC33Q8N5R6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CCDC33Q8N5R6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CCDC33Q8N5R6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC33Q8N5R6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC33Q8N5R6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC33Q8N5R6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC33Q8N5R6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC33Q8N5R6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC33Q8N5R6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC33Q8N5R6 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC33Q8N5R6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC33Q8N5R6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC33Q8N5R6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC33Q8N5R6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC33Q8N5R6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC33Q8N5R6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC33Q8N5R6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC33Q8N5R6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC33Q8N5R6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC33Q8N5R6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC33Q8N5R6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 AL691432.3-201ENST00000621860 400 ntBASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms