Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC25.15■■□□□ 1.62
XRN1Q8IZH2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC25.15■■□□□ 1.62
XRN1Q8IZH2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
XRN1Q8IZH2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
XRN1Q8IZH2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
XRN1Q8IZH2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
XRN1Q8IZH2 KRT18P28-201ENST00000453838 1332 ntBASIC25.15■■□□□ 1.62
XRN1Q8IZH2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
XRN1Q8IZH2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
XRN1Q8IZH2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
XRN1Q8IZH2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
XRN1Q8IZH2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
XRN1Q8IZH2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC25.15■■□□□ 1.62
XRN1Q8IZH2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC25.15■■□□□ 1.62
XRN1Q8IZH2 AC122714.2-201ENST00000502787 707 ntBASIC25.15■■□□□ 1.62
XRN1Q8IZH2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
XRN1Q8IZH2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC25.15■■□□□ 1.62
XRN1Q8IZH2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC25.15■■□□□ 1.62
XRN1Q8IZH2 AC092865.6-201ENST00000642101 219 ntBASIC25.15■■□□□ 1.62
XRN1Q8IZH2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC25.14■■□□□ 1.62
XRN1Q8IZH2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
XRN1Q8IZH2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC25.14■■□□□ 1.62
XRN1Q8IZH2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
XRN1Q8IZH2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC25.14■■□□□ 1.62
XRN1Q8IZH2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
XRN1Q8IZH2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
XRN1Q8IZH2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
XRN1Q8IZH2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
XRN1Q8IZH2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
XRN1Q8IZH2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC25.14■■□□□ 1.61
XRN1Q8IZH2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC25.14■■□□□ 1.61
XRN1Q8IZH2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC25.14■■□□□ 1.61
XRN1Q8IZH2 AC018845.2-201ENST00000568326 409 ntBASIC25.14■■□□□ 1.61
XRN1Q8IZH2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
XRN1Q8IZH2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC25.14■■□□□ 1.61
XRN1Q8IZH2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 AC148477.5-201ENST00000625164 1645 ntBASIC25.13■■□□□ 1.61
XRN1Q8IZH2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 MIR4469-201ENST00000583919 79 ntBASIC25.13■■□□□ 1.61
XRN1Q8IZH2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
XRN1Q8IZH2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
XRN1Q8IZH2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
XRN1Q8IZH2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
XRN1Q8IZH2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC25.12■■□□□ 1.61
XRN1Q8IZH2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
XRN1Q8IZH2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC25.12■■□□□ 1.61
XRN1Q8IZH2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
XRN1Q8IZH2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
XRN1Q8IZH2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC25.12■■□□□ 1.61
XRN1Q8IZH2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC25.12■■□□□ 1.61
XRN1Q8IZH2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC25.12■■□□□ 1.61
XRN1Q8IZH2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC25.12■■□□□ 1.61
XRN1Q8IZH2 AL078644.1-201ENST00000609881 752 ntBASIC25.12■■□□□ 1.61
XRN1Q8IZH2 AL513190.1-201ENST00000621254 727 ntBASIC25.12■■□□□ 1.61
XRN1Q8IZH2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
XRN1Q8IZH2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
XRN1Q8IZH2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
XRN1Q8IZH2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
XRN1Q8IZH2 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC25.12■■□□□ 1.61
XRN1Q8IZH2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
XRN1Q8IZH2 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
XRN1Q8IZH2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
XRN1Q8IZH2 PON3-203ENST00000427422 894 ntTSL 3 BASIC25.12■■□□□ 1.61
XRN1Q8IZH2 CFL1-212ENST00000531413 636 ntTSL 3 BASIC25.12■■□□□ 1.61
XRN1Q8IZH2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC25.12■■□□□ 1.61
XRN1Q8IZH2 AC005593.1-201ENST00000624894 515 ntBASIC25.12■■□□□ 1.61
XRN1Q8IZH2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
XRN1Q8IZH2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
XRN1Q8IZH2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
XRN1Q8IZH2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC25.11■■□□□ 1.61
XRN1Q8IZH2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
XRN1Q8IZH2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
XRN1Q8IZH2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
XRN1Q8IZH2 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC25.11■■□□□ 1.61
XRN1Q8IZH2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC25.11■■□□□ 1.61
XRN1Q8IZH2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
XRN1Q8IZH2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC25.11■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms