Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 AC135776.1-201ENST00000319817 2481 ntBASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD3Q7Z3D4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 AC018470.1-201ENST00000624790 3129 ntBASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 ZNF444P1-201ENST00000559497 298 ntBASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
LYSMD3Q7Z3D4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 AL133373.2-201ENST00000623187 2828 ntBASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 FZD10-202ENST00000539839 3282 ntBASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD3Q7Z3D4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 AC093677.2-201ENST00000600169 1863 ntBASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms