Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 TMED3-204ENST00000543455 1483 ntTSL 216.94■□□□□ 0.38e-7■■□□□ 11.4
LARP4Q71RC2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.74■□□□□ 0.278e-7■■□□□ 11.4
LARP4Q71RC2 TMED3-205ENST00000558562 938 ntTSL 212.96□□□□□ -0.338e-7■■□□□ 11.4
LARP4Q71RC2 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6□□□□□ -1.458e-7■■□□□ 11.4
LARP4Q71RC2 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.273e-6■■□□□ 11.4
LARP4Q71RC2 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.333e-6■■□□□ 11.4
LARP4Q71RC2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.434e-7■■□□□ 11.4
LARP4Q71RC2 COMMD6-202ENST00000377612 580 ntTSL 516.23■□□□□ 0.193e-6■■□□□ 11.4
LARP4Q71RC2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.153e-6■■□□□ 11.4
LARP4Q71RC2 COMMD6-212ENST00000497707 392 ntTSL 510.65□□□□□ -0.73e-6■■□□□ 11.4
LARP4Q71RC2 COMMD6-206ENST00000460675 463 ntTSL 29.42□□□□□ -0.93e-6■■□□□ 11.4
LARP4Q71RC2 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.233e-6■■□□□ 11.4
LARP4Q71RC2 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.75□□□□□ -1.493e-6■■□□□ 11.4
LARP4Q71RC2 COMMD6-210ENST00000483290 595 ntTSL 25.02□□□□□ -1.613e-6■■□□□ 11.4
LARP4Q71RC2 COMMD6-211ENST00000486516 374 ntTSL 54.22□□□□□ -1.733e-6■■□□□ 11.4
LARP4Q71RC2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.17□□□□□ -1.743e-6■■□□□ 11.4
LARP4Q71RC2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.433e-10■■□□□ 11.4
LARP4Q71RC2 PPP1R16A-206ENST00000528430 807 ntTSL 215.38■□□□□ 0.053e-10■■□□□ 11.4
LARP4Q71RC2 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.023e-10■■□□□ 11.4
LARP4Q71RC2 PPP1R16A-203ENST00000526183 4311 ntTSL 214.41□□□□□ -0.13e-10■■□□□ 11.4
LARP4Q71RC2 MRPL28-204ENST00000441883 800 ntTSL 524.6■■□□□ 1.533e-6■■□□□ 11.4
LARP4Q71RC2 C20orf24-205ENST00000491113 734 ntTSL 224.04■■□□□ 1.448e-7■■□□□ 11.4
LARP4Q71RC2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.491e-6■■□□□ 11.4
LARP4Q71RC2 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.31e-6■■□□□ 11.4
LARP4Q71RC2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.31e-11■■□□□ 11.4
LARP4Q71RC2 DKK1-204ENST00000494277 465 ntTSL 54.94□□□□□ -1.621e-11■■□□□ 11.4
LARP4Q71RC2 RPL35-203ENST00000487431 785 ntTSL 1 (best)19.4■□□□□ 0.78e-11■■□□□ 11.4
LARP4Q71RC2 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.238e-11■■□□□ 11.4
LARP4Q71RC2 RPL35-204ENST00000493018 692 ntTSL 312.95□□□□□ -0.348e-11■■□□□ 11.4
LARP4Q71RC2 RPL35-202ENST00000373570 493 ntTSL 3 BASIC8.7□□□□□ -1.028e-11■■□□□ 11.4
LARP4Q71RC2 AL136295.4-201ENST00000561419 4351 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.599e-8■■□□□ 11.4
LARP4Q71RC2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.32■□□□□ 0.682e-12■■□□□ 11.4
LARP4Q71RC2 APLP2-208ENST00000526330 582 ntTSL 318.98■□□□□ 0.632e-12■■□□□ 11.4
LARP4Q71RC2 APLP2-209ENST00000527702 579 ntTSL 418.98■□□□□ 0.632e-12■■□□□ 11.4
LARP4Q71RC2 APLP2-213ENST00000529701 573 ntTSL 518.98■□□□□ 0.632e-12■■□□□ 11.4
LARP4Q71RC2 APLP2-223ENST00000534001 585 ntTSL 418.98■□□□□ 0.632e-12■■□□□ 11.4
LARP4Q71RC2 APLP2-224ENST00000534582 556 ntTSL 518.98■□□□□ 0.632e-12■■□□□ 11.4
LARP4Q71RC2 APLP2-219ENST00000533616 2041 ntTSL 218.56■□□□□ 0.563e-22■■□□□ 11.4
LARP4Q71RC2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.54■□□□□ 0.562e-12■■□□□ 11.4
LARP4Q71RC2 APLP2-225ENST00000534761 551 ntTSL 515.33■□□□□ 0.042e-12■■□□□ 11.4
LARP4Q71RC2 RPL6-204ENST00000548343 612 ntTSL 27.12□□□□□ -1.277e-9■■□□□ 11.4
LARP4Q71RC2 HP-216ENST00000570083 1270 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.69e-9■■□□□ 11.4
LARP4Q71RC2 HP-203ENST00000357763 1482 ntTSL 5 BASIC10.6□□□□□ -0.719e-9■■□□□ 11.4
LARP4Q71RC2 HP-202ENST00000355906 1443 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.839e-9■■□□□ 11.4
LARP4Q71RC2 HP-209ENST00000565574 1187 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.859e-9■■□□□ 11.4
LARP4Q71RC2 HP-201ENST00000228226 960 ntTSL 5 BASIC9.6□□□□□ -0.879e-9■■□□□ 11.4
LARP4Q71RC2 HP-213ENST00000567612 1232 ntTSL 59.54□□□□□ -0.889e-9■■□□□ 11.4
LARP4Q71RC2 HP-218ENST00000613898 1107 ntTSL 1 (best) BASIC9.38□□□□□ -0.919e-9■■□□□ 11.4
LARP4Q71RC2 HP-212ENST00000567185 1251 ntTSL 58.29□□□□□ -1.089e-9■■□□□ 11.4
LARP4Q71RC2 HP-204ENST00000398131 1252 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.089e-9■■□□□ 11.4
LARP4Q71RC2 HP-207ENST00000562526 685 ntTSL 3 BASIC8.01□□□□□ -1.139e-9■■□□□ 11.4
LARP4Q71RC2 HP-211ENST00000566821 3024 ntTSL 26.54□□□□□ -1.369e-9■■□□□ 11.4
LARP4Q71RC2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.584e-6■■□□□ 11.4
LARP4Q71RC2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.054e-6■■□□□ 11.4
LARP4Q71RC2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.928e-8■■□□□ 11.4
LARP4Q71RC2 AP1S1-203ENST00000443943 741 ntTSL 318.85■□□□□ 0.618e-8■■□□□ 11.4
LARP4Q71RC2 PINK1-AS-201ENST00000451424 4443 ntTSL 2 BASIC8.83□□□□□ -12e-31■■□□□ 11.4
LARP4Q71RC2 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.892e-7■■□□□ 11.4
LARP4Q71RC2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.77■■□□□ 1.42e-7■■□□□ 11.4
LARP4Q71RC2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.122e-7■■□□□ 11.4
LARP4Q71RC2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.022e-7■■□□□ 11.4
LARP4Q71RC2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.85■□□□□ 0.772e-7■■□□□ 11.4
LARP4Q71RC2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.742e-7■■□□□ 11.4
LARP4Q71RC2 MPST-207ENST00000485587 5872 ntTSL 215.99■□□□□ 0.152e-7■■□□□ 11.4
LARP4Q71RC2 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.042e-6■■□□□ 11.4
LARP4Q71RC2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.213e-7■■□□□ 11.4
LARP4Q71RC2 LDHB-201ENST00000350669 1303 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.213e-7■■□□□ 11.4
LARP4Q71RC2 LDHB-206ENST00000470985 678 ntTSL 1 (best)6.53□□□□□ -1.363e-7■■□□□ 11.4
LARP4Q71RC2 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.493e-6■■□□□ 11.4
LARP4Q71RC2 MYL4-208ENST00000572316 850 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.593e-6■■□□□ 11.4
LARP4Q71RC2 MYL4-201ENST00000354968 907 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.923e-6■■□□□ 11.4
LARP4Q71RC2 MYL4-206ENST00000571981 920 ntTSL 39.32□□□□□ -0.923e-6■■□□□ 11.4
LARP4Q71RC2 EIF3H-212ENST00000611080 1265 ntTSL 5 BASIC8.63□□□□□ -1.033e-6■■□□□ 11.4
LARP4Q71RC2 EIF3H-201ENST00000276682 2041 ntTSL 2 BASIC8.41□□□□□ -1.063e-6■■□□□ 11.4
LARP4Q71RC2 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.683e-6■■□□□ 11.4
LARP4Q71RC2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.842e-7■■□□□ 11.4
LARP4Q71RC2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.742e-7■■□□□ 11.4
LARP4Q71RC2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.76■■□□□ 1.712e-7■■□□□ 11.4
LARP4Q71RC2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.622e-7■■□□□ 11.4
LARP4Q71RC2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.93■■□□□ 1.582e-7■■□□□ 11.4
LARP4Q71RC2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.942e-7■■□□□ 11.4
LARP4Q71RC2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.932e-7■■□□□ 11.4
LARP4Q71RC2 FGB-201ENST00000302068 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.934e-7■□□□□ 11.3
LARP4Q71RC2 FGB-206ENST00000502545 1320 ntTSL 58.77□□□□□ -1.014e-7■□□□□ 11.3
LARP4Q71RC2 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.195e-23■□□□□ 11.3
LARP4Q71RC2 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.195e-23■□□□□ 11.3
LARP4Q71RC2 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC7.01□□□□□ -1.295e-23■□□□□ 11.3
LARP4Q71RC2 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.149e-11■□□□□ 11.3
LARP4Q71RC2 RPL11-204ENST00000467075 377 ntTSL 312.52□□□□□ -0.411e-20■□□□□ 11.3
LARP4Q71RC2 GDI2-202ENST00000380181 1408 ntTSL 1 (best) BASIC10.71□□□□□ -0.699e-11■□□□□ 11.3
LARP4Q71RC2 GDI2-207ENST00000479928 2499 ntTSL 28.46□□□□□ -1.059e-11■□□□□ 11.3
LARP4Q71RC2 GDI2-205ENST00000447751 834 ntTSL 35.34□□□□□ -1.559e-11■□□□□ 11.3
LARP4Q71RC2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.743e-6■□□□□ 11.3
LARP4Q71RC2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.243e-6■□□□□ 11.3
LARP4Q71RC2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.03■□□□□ 0.481e-7■□□□□ 11.3
LARP4Q71RC2 TNFRSF1A-209ENST00000536717 1503 ntTSL 216.43■□□□□ 0.221e-7■□□□□ 11.3
LARP4Q71RC2 TNFRSF1A-216ENST00000543995 1531 ntTSL 513.6□□□□□ -0.231e-7■□□□□ 11.3
LARP4Q71RC2 TNFRSF1A-215ENST00000543359 627 ntTSL 311.93□□□□□ -0.51e-7■□□□□ 11.3
LARP4Q71RC2 TNFRSF1A-210ENST00000537842 404 ntTSL 32.77□□□□□ -1.971e-7■□□□□ 11.3
LARP4Q71RC2 TGFBI-213ENST00000514554 1691 ntTSL 515.56■□□□□ 0.088e-7■□□□□ 11.3
Retrieved 100 of 15,922 protein–RNA pairs in 305.1 ms