RNA–Protein interactions for RNA: ENST00000355801.4

COMMD6-201, Transcript of COMM domain containing 6, humanhuman

TSL 2 BASIC

Gene COMMD6, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-201ENST00000355801 AEBP2Q6ZN18 517 aaPredicted RBP24.27■■□□□ 1.48
COMMD6-201ENST00000355801 CHIC1Q5VXU3 224 aa22.49■■□□□ 1.19
COMMD6-201ENST00000355801 POTEDQ86YR6 584 aa21.76■■□□□ 1.07
COMMD6-201ENST00000355801 SENP3Q9H4L4 574 aaPredicted RBP20.85■□□□□ 0.93
COMMD6-201ENST00000355801 PHF23Q9BUL5 403 aaPredicted RBP20.38■□□□□ 0.85
COMMD6-201ENST00000355801 FOXD1Q16676 465 aa19.74■□□□□ 0.75
COMMD6-201ENST00000355801 MSH5O43196 834 aa19.06■□□□□ 0.64
COMMD6-201ENST00000355801 PIAS4Q8N2W9 510 aaPredicted RBP18■□□□□ 0.47
COMMD6-201ENST00000355801 CACNB1Q02641 598 aaPredicted RBP17.51■□□□□ 0.39
COMMD6-201ENST00000355801 PPP6R1Q9UPN7 881 aa17.12■□□□□ 0.33
COMMD6-201ENST00000355801 ADRA2BP18089 450 aa16.95■□□□□ 0.3
COMMD6-201ENST00000355801 POTEHQ6S545 545 aa16.67■□□□□ 0.26
COMMD6-201ENST00000355801 DMRT2Q9Y5R5 561 aa16.28■□□□□ 0.2
COMMD6-201ENST00000355801 MAPK8IP2Q13387 824 aaPredicted RBP16.15■□□□□ 0.18
COMMD6-201ENST00000355801 RNF39Q9H2S5 420 aa16.15■□□□□ 0.18
COMMD6-201ENST00000355801 PLPPR3Q6T4P5 718 aa16.09■□□□□ 0.17
COMMD6-201ENST00000355801 DCAF8L1A6NGE4 600 aa15.77■□□□□ 0.12
COMMD6-201ENST00000355801 C1QBPQ07021 282 aaKnown RBP15.75■□□□□ 0.11
COMMD6-201ENST00000355801 SCAF1Q9H7N4 1312 aaKnown RBP15.33■□□□□ 0.04
COMMD6-201ENST00000355801 HOXD11P31277 338 aaPredicted RBP14.96□□□□□ -0.01
COMMD6-201ENST00000355801 SP7Q8TDD2 431 aaPredicted RBP14.77□□□□□ -0.05
COMMD6-201ENST00000355801 DNAJC5BQ9UF47 199 aa14.68□□□□□ -0.06
COMMD6-201ENST00000355801 PLSCR2Q9NRY7 297 aa14.55□□□□□ -0.08
COMMD6-201ENST00000355801 DSG3P32926 999 aa14.54□□□□□ -0.08
COMMD6-201ENST00000355801 RNF216Q9NWF9 866 aaPredicted RBP14.35□□□□□ -0.11
COMMD6-201ENST00000355801 CHRDL2Q6WN34 429 aa14.31□□□□□ -0.12
COMMD6-201ENST00000355801 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.27□□□□□ -0.13
COMMD6-201ENST00000355801 CAPN15O75808 1086 aa14.2□□□□□ -0.14
COMMD6-201ENST00000355801 SPINK5Q9NQ38 1064 aaPredicted RBP14.2□□□□□ -0.14
COMMD6-201ENST00000355801 CNKSR2Q8WXI2 1034 aa14.02□□□□□ -0.17
COMMD6-201ENST00000355801 PPP4R3CPQ6ZMV5 832 aa13.92□□□□□ -0.18
COMMD6-201ENST00000355801 HAX1O00165 279 aa13.84□□□□□ -0.19
COMMD6-201ENST00000355801 LHX8Q68G74 356 aa13.84□□□□□ -0.19
COMMD6-201ENST00000355801 RBM42Q9BTD8 480 aaKnown RBP13.82□□□□□ -0.2
COMMD6-201ENST00000355801 U3KPZ7 1027 aaPredicted RBP13.82□□□□□ -0.2
COMMD6-201ENST00000355801 ABCB7O75027 752 aa13.78□□□□□ -0.2
COMMD6-201ENST00000355801 EVX2Q03828 476 aa13.62□□□□□ -0.23
COMMD6-201ENST00000355801 PIP4P2Q8N4L2 257 aa13.6□□□□□ -0.23
COMMD6-201ENST00000355801 TRHP20396 242 aaPredicted RBP13.56□□□□□ -0.24
COMMD6-201ENST00000355801 ZNF219Q9P2Y4 722 aaPredicted RBP13.37□□□□□ -0.27
COMMD6-201ENST00000355801 NCBP3Q53F19 620 aaKnown RBP13.22□□□□□ -0.29
COMMD6-201ENST00000355801 FXR2P51116 673 aaKnown RBP eCLIP13.2□□□□□ -0.3
COMMD6-201ENST00000355801 POTEMA6NI47 508 aa13.16□□□□□ -0.3
COMMD6-201ENST00000355801 AKT1S1Q96B36 256 aa13.15□□□□□ -0.3
COMMD6-201ENST00000355801 NPM3O75607 178 aaKnown RBP13.13□□□□□ -0.31
COMMD6-201ENST00000355801 GABBR2O75899 941 aa13.13□□□□□ -0.31
COMMD6-201ENST00000355801 REM2Q8IYK8 340 aaPredicted RBP13.09□□□□□ -0.31
COMMD6-201ENST00000355801 APLP2Q06481 763 aa13.05□□□□□ -0.32
COMMD6-201ENST00000355801 POTEGQ6S5H5 508 aa13.05□□□□□ -0.32
COMMD6-201ENST00000355801 PITPNM1O00562 1244 aa13.01□□□□□ -0.33
COMMD6-201ENST00000355801 POTEIP0CG38 1075 aa12.89□□□□□ -0.35
COMMD6-201ENST00000355801 PCDH10Q9P2E7 1040 aa12.87□□□□□ -0.35
COMMD6-201ENST00000355801 C19orf67A6NJJ6 358 aa12.85□□□□□ -0.35
COMMD6-201ENST00000355801 KCNA4P22459 653 aa12.8□□□□□ -0.36
COMMD6-201ENST00000355801 POLA2Q14181 598 aa12.76□□□□□ -0.37
COMMD6-201ENST00000355801 OTUD5Q96G74 571 aa12.73□□□□□ -0.37
COMMD6-201ENST00000355801 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.64□□□□□ -0.39
COMMD6-201ENST00000355801 HNRNPUL2Q1KMD3 747 aaKnown RBP12.64□□□□□ -0.39
COMMD6-201ENST00000355801 PRKAR2AP13861 404 aaKnown RBP12.63□□□□□ -0.39
COMMD6-201ENST00000355801 SLC4A2P04920 1241 aa12.6□□□□□ -0.39
COMMD6-201ENST00000355801 SAMD1Q6SPF0 538 aaPredicted RBP12.53□□□□□ -0.4
COMMD6-201ENST00000355801 OSCARQ8IYS5 282 aa12.48□□□□□ -0.41
COMMD6-201ENST00000355801 POTEB2H3BUK9 544 aa12.44□□□□□ -0.42
COMMD6-201ENST00000355801 LCE2DQ5TA82 110 aaPredicted RBP12.39□□□□□ -0.43
COMMD6-201ENST00000355801 DCBLD2Q96PD2 775 aa12.36□□□□□ -0.43
COMMD6-201ENST00000355801 ZBTB12Q9Y330 459 aaPredicted RBP12.23□□□□□ -0.45
COMMD6-201ENST00000355801 FAM163AQ96GL9 167 aaPredicted RBP12.19□□□□□ -0.46
COMMD6-201ENST00000355801 CHADLQ6NUI6 762 aa12.17□□□□□ -0.46
COMMD6-201ENST00000355801 CLEC11AQ9Y240 323 aa12.16□□□□□ -0.46
COMMD6-201ENST00000355801 CDAN1Q8IWY9 1227 aa12.15□□□□□ -0.46
COMMD6-201ENST00000355801 CD44P16070 742 aaKnown RBP12.12□□□□□ -0.47
COMMD6-201ENST00000355801 CLCN6P51797 869 aa12.11□□□□□ -0.47
COMMD6-201ENST00000355801 MYCNP04198 464 aaPredicted RBP12.07□□□□□ -0.48
COMMD6-201ENST00000355801 MMRN1Q13201 1228 aa12.06□□□□□ -0.48
COMMD6-201ENST00000355801 SLC4A1APQ9BWU0 796 aaKnown RBP12.01□□□□□ -0.49
COMMD6-201ENST00000355801 SPDYE1Q8NFV5 336 aaPredicted RBP12□□□□□ -0.49
COMMD6-201ENST00000355801 POTEJP0CG39 1038 aa11.97□□□□□ -0.49
COMMD6-201ENST00000355801 ATF5Q9Y2D1 282 aaPredicted RBP11.96□□□□□ -0.49
COMMD6-201ENST00000355801 SPNS2Q8IVW8 549 aa11.89□□□□□ -0.51
COMMD6-201ENST00000355801 FOXD4L1Q9NU39 408 aa11.89□□□□□ -0.51
COMMD6-201ENST00000355801 GALR2O43603 387 aaPredicted RBP11.87□□□□□ -0.51
COMMD6-201ENST00000355801 PELP1Q8IZL8 1130 aaKnown RBP11.83□□□□□ -0.52
COMMD6-201ENST00000355801 ZNF579Q8NAF0 562 aaKnown RBP11.82□□□□□ -0.52
COMMD6-201ENST00000355801 ZBTB22O15209 634 aa11.8□□□□□ -0.52
COMMD6-201ENST00000355801 MAMSTRQ6ZN01 415 aa11.8□□□□□ -0.52
COMMD6-201ENST00000355801 SPDYE2BA6NHP3 402 aa11.77□□□□□ -0.53
COMMD6-201ENST00000355801 SPDYE6P0CI01 402 aa11.77□□□□□ -0.53
COMMD6-201ENST00000355801 SPDYE2Q495Y8 402 aa11.77□□□□□ -0.53
COMMD6-201ENST00000355801 FARP1Q9Y4F1 1045 aaPredicted RBP11.72□□□□□ -0.53
COMMD6-201ENST00000355801 METRNQ9UJH8 293 aa11.71□□□□□ -0.53
COMMD6-201ENST00000355801 SCUBE2Q9NQ36 999 aa11.67□□□□□ -0.54
COMMD6-201ENST00000355801 ZRANB1Q9UGI0 708 aa11.67□□□□□ -0.54
COMMD6-201ENST00000355801 PRR29P0C7W0 189 aa11.64□□□□□ -0.55
COMMD6-201ENST00000355801 C7P10643 843 aa11.53□□□□□ -0.56
COMMD6-201ENST00000355801 SLC39A7Q92504 469 aa11.52□□□□□ -0.57
COMMD6-201ENST00000355801 ST18O60284 1047 aa11.47□□□□□ -0.57
COMMD6-201ENST00000355801 ATXN8OSP0DMR3 200 aa11.46□□□□□ -0.57
COMMD6-201ENST00000355801 SSUH2Q9Y2M2 353 aa11.45□□□□□ -0.58
COMMD6-201ENST00000355801 ASTLQ6HA08 431 aaPredicted RBP11.43□□□□□ -0.58
COMMD6-201ENST00000355801 PHF12Q96QT6 1004 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms