RNA–Protein interactions for RNA: ENST00000483290.5

COMMD6-210, Transcript of COMM domain containing 6, humanhuman

TSL 2

Gene COMMD6, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-210ENST00000483290 AEBP2Q6ZN18 517 aaPredicted RBP27.39■■□□□ 1.98
COMMD6-210ENST00000483290 CHIC1Q5VXU3 224 aa25.8■■□□□ 1.72
COMMD6-210ENST00000483290 SENP3Q9H4L4 574 aaPredicted RBP23.6■■□□□ 1.37
COMMD6-210ENST00000483290 PHF23Q9BUL5 403 aaPredicted RBP23.17■■□□□ 1.3
COMMD6-210ENST00000483290 FOXD1Q16676 465 aa21.94■■□□□ 1.1
COMMD6-210ENST00000483290 POTEDQ86YR6 584 aa20.9■□□□□ 0.94
COMMD6-210ENST00000483290 MSH5O43196 834 aa20.82■□□□□ 0.92
COMMD6-210ENST00000483290 PIAS4Q8N2W9 510 aaPredicted RBP20.5■□□□□ 0.87
COMMD6-210ENST00000483290 PLPPR3Q6T4P5 718 aa20.44■□□□□ 0.86
COMMD6-210ENST00000483290 PPP6R1Q9UPN7 881 aa20.14■□□□□ 0.81
COMMD6-210ENST00000483290 ADRA2BP18089 450 aa20.1■□□□□ 0.81
COMMD6-210ENST00000483290 DMRT2Q9Y5R5 561 aa18.6■□□□□ 0.57
COMMD6-210ENST00000483290 SCAF1Q9H7N4 1312 aaKnown RBP18.58■□□□□ 0.57
COMMD6-210ENST00000483290 MAPK8IP2Q13387 824 aaPredicted RBP18.55■□□□□ 0.56
COMMD6-210ENST00000483290 CACNB1Q02641 598 aaPredicted RBP18.11■□□□□ 0.49
COMMD6-210ENST00000483290 DCAF8L1A6NGE4 600 aa17.96■□□□□ 0.47
COMMD6-210ENST00000483290 PPP4R3CPQ6ZMV5 832 aa17.82■□□□□ 0.44
COMMD6-210ENST00000483290 HOXD11P31277 338 aaPredicted RBP17.74■□□□□ 0.43
COMMD6-210ENST00000483290 RNF39Q9H2S5 420 aa17.64■□□□□ 0.41
COMMD6-210ENST00000483290 CNKSR2Q8WXI2 1034 aa17.62■□□□□ 0.41
COMMD6-210ENST00000483290 RNF216Q9NWF9 866 aaPredicted RBP17.54■□□□□ 0.4
COMMD6-210ENST00000483290 C1QBPQ07021 282 aaKnown RBP17.43■□□□□ 0.38
COMMD6-210ENST00000483290 DNAJC5BQ9UF47 199 aa17.26■□□□□ 0.35
COMMD6-210ENST00000483290 NCBP3Q53F19 620 aaKnown RBP17.12■□□□□ 0.33
COMMD6-210ENST00000483290 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17■□□□□ 0.31
COMMD6-210ENST00000483290 NPM3O75607 178 aaKnown RBP16.74■□□□□ 0.27
COMMD6-210ENST00000483290 U3KPZ7 1027 aaPredicted RBP16.49■□□□□ 0.23
COMMD6-210ENST00000483290 CAPN15O75808 1086 aa16.47■□□□□ 0.23
COMMD6-210ENST00000483290 DSG3P32926 999 aa16.38■□□□□ 0.21
COMMD6-210ENST00000483290 SPINK5Q9NQ38 1064 aaPredicted RBP16.36■□□□□ 0.21
COMMD6-210ENST00000483290 POTEHQ6S545 545 aa16.35■□□□□ 0.21
COMMD6-210ENST00000483290 APLP2Q06481 763 aa16.21■□□□□ 0.19
COMMD6-210ENST00000483290 TRHP20396 242 aaPredicted RBP16.09■□□□□ 0.17
COMMD6-210ENST00000483290 ZNF219Q9P2Y4 722 aaPredicted RBP16.09■□□□□ 0.17
COMMD6-210ENST00000483290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.05■□□□□ 0.16
COMMD6-210ENST00000483290 HNRNPUL2Q1KMD3 747 aaKnown RBP16.05■□□□□ 0.16
COMMD6-210ENST00000483290 KCNA4P22459 653 aa16.04■□□□□ 0.16
COMMD6-210ENST00000483290 SLC4A2P04920 1241 aa16.03■□□□□ 0.16
COMMD6-210ENST00000483290 ABCB7O75027 752 aa16■□□□□ 0.15
COMMD6-210ENST00000483290 SAMD1Q6SPF0 538 aaPredicted RBP15.9■□□□□ 0.14
COMMD6-210ENST00000483290 RBM42Q9BTD8 480 aaKnown RBP15.78■□□□□ 0.12
COMMD6-210ENST00000483290 MYCNP04198 464 aaPredicted RBP15.58■□□□□ 0.08
COMMD6-210ENST00000483290 POLA2Q14181 598 aa15.53■□□□□ 0.08
COMMD6-210ENST00000483290 CHRDL2Q6WN34 429 aa15.5■□□□□ 0.07
COMMD6-210ENST00000483290 ZBTB12Q9Y330 459 aaPredicted RBP15.3■□□□□ 0.04
COMMD6-210ENST00000483290 AKT1S1Q96B36 256 aa15.26■□□□□ 0.03
COMMD6-210ENST00000483290 FOXD4L1Q9NU39 408 aa15.17■□□□□ 0.02
COMMD6-210ENST00000483290 SP7Q8TDD2 431 aaPredicted RBP15.15■□□□□ 0.02
COMMD6-210ENST00000483290 SLC4A1APQ9BWU0 796 aaKnown RBP15.13■□□□□ 0.01
COMMD6-210ENST00000483290 ATF5Q9Y2D1 282 aaPredicted RBP15.1■□□□□ 0.01
COMMD6-210ENST00000483290 REM2Q8IYK8 340 aaPredicted RBP15.08■□□□□ 0
COMMD6-210ENST00000483290 OSCARQ8IYS5 282 aa15.04■□□□□ -0
COMMD6-210ENST00000483290 PIP4P2Q8N4L2 257 aa15.02■□□□□ -0
COMMD6-210ENST00000483290 HAX1O00165 279 aa14.93□□□□□ -0.02
COMMD6-210ENST00000483290 PITPNM1O00562 1244 aa14.91□□□□□ -0.02
COMMD6-210ENST00000483290 FXR2P51116 673 aaKnown RBP eCLIP14.86□□□□□ -0.03
COMMD6-210ENST00000483290 ATXN8OSP0DMR3 200 aa14.76□□□□□ -0.05
COMMD6-210ENST00000483290 FBLN2P98095 1184 aa14.74□□□□□ -0.05
COMMD6-210ENST00000483290 SPDYE2BA6NHP3 402 aa14.73□□□□□ -0.05
COMMD6-210ENST00000483290 SPDYE6P0CI01 402 aa14.73□□□□□ -0.05
COMMD6-210ENST00000483290 SPDYE2Q495Y8 402 aa14.73□□□□□ -0.05
COMMD6-210ENST00000483290 ZBTB22O15209 634 aa14.66□□□□□ -0.06
COMMD6-210ENST00000483290 SPDYE1Q8NFV5 336 aaPredicted RBP14.6□□□□□ -0.07
COMMD6-210ENST00000483290 CLEC11AQ9Y240 323 aa14.59□□□□□ -0.07
COMMD6-210ENST00000483290 PRKAR2AP13861 404 aaKnown RBP14.57□□□□□ -0.08
COMMD6-210ENST00000483290 EVX2Q03828 476 aa14.54□□□□□ -0.08
COMMD6-210ENST00000483290 ZNF692Q9BU19 519 aaPredicted RBP14.49□□□□□ -0.09
COMMD6-210ENST00000483290 SSUH2Q9Y2M2 353 aa14.42□□□□□ -0.1
COMMD6-210ENST00000483290 C19orf67A6NJJ6 358 aa14.4□□□□□ -0.1
COMMD6-210ENST00000483290 MKRN4PQ13434 485 aaPredicted RBP14.39□□□□□ -0.11
COMMD6-210ENST00000483290 GABBR2O75899 941 aa14.29□□□□□ -0.12
COMMD6-210ENST00000483290 PRR29P0C7W0 189 aa14.29□□□□□ -0.12
COMMD6-210ENST00000483290 CHADLQ6NUI6 762 aa14.27□□□□□ -0.13
COMMD6-210ENST00000483290 PABPN1Q86U42 306 aaKnown RBP eCLIP14.23□□□□□ -0.13
COMMD6-210ENST00000483290 LHX8Q68G74 356 aa14.2□□□□□ -0.14
COMMD6-210ENST00000483290 CD44P16070 742 aaKnown RBP14.09□□□□□ -0.15
COMMD6-210ENST00000483290 CLCN6P51797 869 aa14.06□□□□□ -0.16
COMMD6-210ENST00000483290 FARP1Q9Y4F1 1045 aaPredicted RBP14.04□□□□□ -0.16
COMMD6-210ENST00000483290 DCBLD2Q96PD2 775 aa13.93□□□□□ -0.18
COMMD6-210ENST00000483290 POTEIP0CG38 1075 aa13.9□□□□□ -0.18
COMMD6-210ENST00000483290 STAG3Q9UJ98 1225 aa13.85□□□□□ -0.19
COMMD6-210ENST00000483290 ZRANB1Q9UGI0 708 aa13.84□□□□□ -0.19
COMMD6-210ENST00000483290 ZNF579Q8NAF0 562 aaKnown RBP13.83□□□□□ -0.2
COMMD6-210ENST00000483290 PAK3O75914 559 aaPredicted RBP13.74□□□□□ -0.21
COMMD6-210ENST00000483290 CREBZFQ9NS37 354 aa13.74□□□□□ -0.21
COMMD6-210ENST00000483290 PLSCR2Q9NRY7 297 aa13.67□□□□□ -0.22
COMMD6-210ENST00000483290 GALR2O43603 387 aaPredicted RBP13.66□□□□□ -0.22
COMMD6-210ENST00000483290 CSRNP3Q8WYN3 585 aa13.66□□□□□ -0.22
COMMD6-210ENST00000483290 SPDYE4A6NLX3 237 aa13.62□□□□□ -0.23
COMMD6-210ENST00000483290 NPM1P06748 294 aaKnown RBP eCLIP13.62□□□□□ -0.23
COMMD6-210ENST00000483290 PHF12Q96QT6 1004 aa13.54□□□□□ -0.24
COMMD6-210ENST00000483290 OTUD5Q96G74 571 aa13.52□□□□□ -0.25
COMMD6-210ENST00000483290 POTEB2H3BUK9 544 aa13.43□□□□□ -0.26
COMMD6-210ENST00000483290 MNX1P50219 401 aaPredicted RBP13.41□□□□□ -0.26
COMMD6-210ENST00000483290 POTEMA6NI47 508 aa13.39□□□□□ -0.27
COMMD6-210ENST00000483290 SLC39A7Q92504 469 aa13.38□□□□□ -0.27
COMMD6-210ENST00000483290 METRNQ9UJH8 293 aa13.38□□□□□ -0.27
COMMD6-210ENST00000483290 PELP1Q8IZL8 1130 aaKnown RBP13.37□□□□□ -0.27
COMMD6-210ENST00000483290 C7P10643 843 aa13.36□□□□□ -0.27
COMMD6-210ENST00000483290 ASTLQ6HA08 431 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms