RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 AEBP2Q6ZN18 517 aaPredicted RBP10.34□□□□□ -0.75
TNFRSF1A-210ENST00000537842 CHIC1Q5VXU3 224 aa10.1□□□□□ -0.79
TNFRSF1A-210ENST00000537842 PHF23Q9BUL5 403 aaPredicted RBP8.89□□□□□ -0.99
TNFRSF1A-210ENST00000537842 SENP3Q9H4L4 574 aaPredicted RBP8.77□□□□□ -1.01
TNFRSF1A-210ENST00000537842 PLPPR3Q6T4P5 718 aa8.24□□□□□ -1.09
TNFRSF1A-210ENST00000537842 FOXD1Q16676 465 aa8.14□□□□□ -1.11
TNFRSF1A-210ENST00000537842 ADRA2BP18089 450 aa7.89□□□□□ -1.15
TNFRSF1A-210ENST00000537842 PPP6R1Q9UPN7 881 aa7.85□□□□□ -1.15
TNFRSF1A-210ENST00000537842 PIAS4Q8N2W9 510 aaPredicted RBP7.75□□□□□ -1.17
TNFRSF1A-210ENST00000537842 MSH5O43196 834 aa7.48□□□□□ -1.21
TNFRSF1A-210ENST00000537842 PPP4R3CPQ6ZMV5 832 aa7.28□□□□□ -1.24
TNFRSF1A-210ENST00000537842 KCNA4P22459 653 aa7.18□□□□□ -1.26
TNFRSF1A-210ENST00000537842 SCAF1Q9H7N4 1312 aaKnown RBP7.17□□□□□ -1.26
TNFRSF1A-210ENST00000537842 MAPK8IP2Q13387 824 aaPredicted RBP7.15□□□□□ -1.26
TNFRSF1A-210ENST00000537842 NCBP3Q53F19 620 aaKnown RBP7.09□□□□□ -1.27
TNFRSF1A-210ENST00000537842 CNKSR2Q8WXI2 1034 aa7.04□□□□□ -1.28
TNFRSF1A-210ENST00000537842 NPM3O75607 178 aaKnown RBP6.99□□□□□ -1.29
TNFRSF1A-210ENST00000537842 DMRT2Q9Y5R5 561 aa6.98□□□□□ -1.29
TNFRSF1A-210ENST00000537842 DCAF8L1A6NGE4 600 aa6.88□□□□□ -1.31
TNFRSF1A-210ENST00000537842 RNF216Q9NWF9 866 aaPredicted RBP6.87□□□□□ -1.31
TNFRSF1A-210ENST00000537842 SLC4A1APQ9BWU0 796 aaKnown RBP6.85□□□□□ -1.31
TNFRSF1A-210ENST00000537842 EHMT2Q96KQ7 1210 aa6.82□□□□□ -1.32
TNFRSF1A-210ENST00000537842 HOXD11P31277 338 aaPredicted RBP6.81□□□□□ -1.32
TNFRSF1A-210ENST00000537842 POTEDQ86YR6 584 aa6.79□□□□□ -1.32
TNFRSF1A-210ENST00000537842 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.63□□□□□ -1.35
TNFRSF1A-210ENST00000537842 ZBTB22O15209 634 aa6.59□□□□□ -1.35
TNFRSF1A-210ENST00000537842 FOXD4L1Q9NU39 408 aa6.58□□□□□ -1.36
TNFRSF1A-210ENST00000537842 DNAJC5BQ9UF47 199 aa6.58□□□□□ -1.36
TNFRSF1A-210ENST00000537842 SLC4A2P04920 1241 aa6.57□□□□□ -1.36
TNFRSF1A-210ENST00000537842 CSRNP3Q8WYN3 585 aa6.56□□□□□ -1.36
TNFRSF1A-210ENST00000537842 U3KPZ7 1027 aaPredicted RBP6.47□□□□□ -1.37
TNFRSF1A-210ENST00000537842 MYCNP04198 464 aaPredicted RBP6.46□□□□□ -1.38
TNFRSF1A-210ENST00000537842 RNF39Q9H2S5 420 aa6.4□□□□□ -1.38
TNFRSF1A-210ENST00000537842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.38□□□□□ -1.39
TNFRSF1A-210ENST00000537842 HNRNPUL2Q1KMD3 747 aaKnown RBP6.38□□□□□ -1.39
TNFRSF1A-210ENST00000537842 SAMD1Q6SPF0 538 aaPredicted RBP6.37□□□□□ -1.39
TNFRSF1A-210ENST00000537842 CAPN15O75808 1086 aa6.34□□□□□ -1.39
TNFRSF1A-210ENST00000537842 TRHP20396 242 aaPredicted RBP6.32□□□□□ -1.4
TNFRSF1A-210ENST00000537842 SPINK5Q9NQ38 1064 aaPredicted RBP6.32□□□□□ -1.4
TNFRSF1A-210ENST00000537842 C1QBPQ07021 282 aaKnown RBP6.31□□□□□ -1.4
TNFRSF1A-210ENST00000537842 CACNB1Q02641 598 aaPredicted RBP6.3□□□□□ -1.4
TNFRSF1A-210ENST00000537842 APLP2Q06481 763 aa6.3□□□□□ -1.4
TNFRSF1A-210ENST00000537842 ATF5Q9Y2D1 282 aaPredicted RBP6.3□□□□□ -1.4
TNFRSF1A-210ENST00000537842 ATXN8OSP0DMR3 200 aa6.25□□□□□ -1.41
TNFRSF1A-210ENST00000537842 ABCB7O75027 752 aa6.24□□□□□ -1.41
TNFRSF1A-210ENST00000537842 ZNF219Q9P2Y4 722 aaPredicted RBP6.24□□□□□ -1.41
TNFRSF1A-210ENST00000537842 POLA2Q14181 598 aa6.15□□□□□ -1.42
TNFRSF1A-210ENST00000537842 DSG3P32926 999 aa6.11□□□□□ -1.43
TNFRSF1A-210ENST00000537842 FBLN2P98095 1184 aa6.06□□□□□ -1.44
TNFRSF1A-210ENST00000537842 NISCHQ9Y2I1 1504 aa6.05□□□□□ -1.44
TNFRSF1A-210ENST00000537842 FKBP8Q14318 412 aa6.02□□□□□ -1.45
TNFRSF1A-210ENST00000537842 ZBTB12Q9Y330 459 aaPredicted RBP6.02□□□□□ -1.45
TNFRSF1A-210ENST00000537842 MKRN4PQ13434 485 aaPredicted RBP6.01□□□□□ -1.45
TNFRSF1A-210ENST00000537842 OSCARQ8IYS5 282 aa6□□□□□ -1.45
TNFRSF1A-210ENST00000537842 SPDYE4A6NLX3 237 aa5.93□□□□□ -1.46
TNFRSF1A-210ENST00000537842 ZNF692Q9BU19 519 aaPredicted RBP5.89□□□□□ -1.47
TNFRSF1A-210ENST00000537842 SPDYE2BA6NHP3 402 aa5.86□□□□□ -1.47
TNFRSF1A-210ENST00000537842 SPDYE6P0CI01 402 aa5.86□□□□□ -1.47
TNFRSF1A-210ENST00000537842 SPDYE2Q495Y8 402 aa5.86□□□□□ -1.47
TNFRSF1A-210ENST00000537842 RBM42Q9BTD8 480 aaKnown RBP5.84□□□□□ -1.47
TNFRSF1A-210ENST00000537842 PABPN1Q86U42 306 aaKnown RBP eCLIP5.82□□□□□ -1.48
TNFRSF1A-210ENST00000537842 SSUH2Q9Y2M2 353 aa5.79□□□□□ -1.48
TNFRSF1A-210ENST00000537842 CLEC11AQ9Y240 323 aa5.77□□□□□ -1.49
TNFRSF1A-210ENST00000537842 AKT1S1Q96B36 256 aa5.75□□□□□ -1.49
TNFRSF1A-210ENST00000537842 REM2Q8IYK8 340 aaPredicted RBP5.72□□□□□ -1.49
TNFRSF1A-210ENST00000537842 PROM2Q8N271 834 aa5.71□□□□□ -1.5
TNFRSF1A-210ENST00000537842 SPDYE1Q8NFV5 336 aaPredicted RBP5.71□□□□□ -1.5
TNFRSF1A-210ENST00000537842 FBXO3Q9UK99 471 aa5.71□□□□□ -1.5
TNFRSF1A-210ENST00000537842 PITPNM1O00562 1244 aa5.69□□□□□ -1.5
TNFRSF1A-210ENST00000537842 PLCD3Q8N3E9 789 aa5.68□□□□□ -1.5
TNFRSF1A-210ENST00000537842 VASPP50552 380 aaPredicted RBP5.67□□□□□ -1.5
TNFRSF1A-210ENST00000537842 STAG3Q9UJ98 1225 aa5.67□□□□□ -1.5
TNFRSF1A-210ENST00000537842 PRR29P0C7W0 189 aa5.66□□□□□ -1.5
TNFRSF1A-210ENST00000537842 MIER1Q8N108 512 aa5.64□□□□□ -1.51
TNFRSF1A-210ENST00000537842 KLHL34Q8N239 644 aa5.64□□□□□ -1.51
TNFRSF1A-210ENST00000537842 PLEKHG5O94827 1062 aa5.62□□□□□ -1.51
TNFRSF1A-210ENST00000537842 CHADLQ6NUI6 762 aa5.61□□□□□ -1.51
TNFRSF1A-210ENST00000537842 CHRDL2Q6WN34 429 aa5.61□□□□□ -1.51
TNFRSF1A-210ENST00000537842 IFNLR1Q8IU57 520 aaPredicted RBP5.57□□□□□ -1.52
TNFRSF1A-210ENST00000537842 PRKAR2AP13861 404 aaKnown RBP5.56□□□□□ -1.52
TNFRSF1A-210ENST00000537842 CREBZFQ9NS37 354 aa5.55□□□□□ -1.52
TNFRSF1A-210ENST00000537842 PIP4P2Q8N4L2 257 aa5.54□□□□□ -1.52
TNFRSF1A-210ENST00000537842 ZBTB47Q9UFB7 747 aaPredicted RBP5.53□□□□□ -1.52
TNFRSF1A-210ENST00000537842 SPOCK2Q92563 424 aa5.52□□□□□ -1.53
TNFRSF1A-210ENST00000537842 RTN4Q9NQC3 1192 aaKnown RBP5.52□□□□□ -1.53
TNFRSF1A-210ENST00000537842 CIZ1Q9ULV3 898 aaPredicted RBP5.51□□□□□ -1.53
TNFRSF1A-210ENST00000537842 FXR2P51116 673 aaKnown RBP eCLIP5.5□□□□□ -1.53
TNFRSF1A-210ENST00000537842 DCAF8L2P0C7V8 631 aa5.49□□□□□ -1.53
TNFRSF1A-210ENST00000537842 NPM1P06748 294 aaKnown RBP eCLIP5.48□□□□□ -1.53
TNFRSF1A-210ENST00000537842 AMER1Q5JTC6 1135 aaPredicted RBP5.48□□□□□ -1.53
TNFRSF1A-210ENST00000537842 FARP1Q9Y4F1 1045 aaPredicted RBP5.48□□□□□ -1.53
TNFRSF1A-210ENST00000537842 TSPYL2Q9H2G4 693 aaPredicted RBP5.47□□□□□ -1.53
TNFRSF1A-210ENST00000537842 FAM212AQ96EL1 285 aa5.46□□□□□ -1.54
TNFRSF1A-210ENST00000537842 MNX1P50219 401 aaPredicted RBP5.45□□□□□ -1.54
TNFRSF1A-210ENST00000537842 DCAF8Q5TAQ9 597 aa5.45□□□□□ -1.54
TNFRSF1A-210ENST00000537842 RASEFQ8IZ41 740 aa5.45□□□□□ -1.54
TNFRSF1A-210ENST00000537842 PAK3O75914 559 aaPredicted RBP5.43□□□□□ -1.54
TNFRSF1A-210ENST00000537842 CD44P16070 742 aaKnown RBP5.42□□□□□ -1.54
TNFRSF1A-210ENST00000537842 NUBP1P53384 320 aa5.42□□□□□ -1.54
TNFRSF1A-210ENST00000537842 HAX1O00165 279 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms