RNA–Protein interactions for RNA: ENST00000486516.5

COMMD6-211, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-211ENST00000486516 AEBP2Q6ZN18 517 aaPredicted RBP24.93■■□□□ 1.58
COMMD6-211ENST00000486516 CHIC1Q5VXU3 224 aa23.13■■□□□ 1.29
COMMD6-211ENST00000486516 SENP3Q9H4L4 574 aaPredicted RBP21.21■□□□□ 0.99
COMMD6-211ENST00000486516 PHF23Q9BUL5 403 aaPredicted RBP20.93■□□□□ 0.94
COMMD6-211ENST00000486516 FOXD1Q16676 465 aa19.94■□□□□ 0.78
COMMD6-211ENST00000486516 POTEDQ86YR6 584 aa19.35■□□□□ 0.69
COMMD6-211ENST00000486516 MSH5O43196 834 aa18.74■□□□□ 0.59
COMMD6-211ENST00000486516 PIAS4Q8N2W9 510 aaPredicted RBP18.47■□□□□ 0.55
COMMD6-211ENST00000486516 PPP6R1Q9UPN7 881 aa18.28■□□□□ 0.52
COMMD6-211ENST00000486516 ADRA2BP18089 450 aa18.18■□□□□ 0.5
COMMD6-211ENST00000486516 PLPPR3Q6T4P5 718 aa18.11■□□□□ 0.49
COMMD6-211ENST00000486516 MAPK8IP2Q13387 824 aaPredicted RBP16.89■□□□□ 0.29
COMMD6-211ENST00000486516 DMRT2Q9Y5R5 561 aa16.77■□□□□ 0.28
COMMD6-211ENST00000486516 CACNB1Q02641 598 aaPredicted RBP16.49■□□□□ 0.23
COMMD6-211ENST00000486516 SCAF1Q9H7N4 1312 aaKnown RBP16.44■□□□□ 0.22
COMMD6-211ENST00000486516 DCAF8L1A6NGE4 600 aa16.17■□□□□ 0.18
COMMD6-211ENST00000486516 RNF39Q9H2S5 420 aa16.01■□□□□ 0.15
COMMD6-211ENST00000486516 HOXD11P31277 338 aaPredicted RBP15.92■□□□□ 0.14
COMMD6-211ENST00000486516 PPP4R3CPQ6ZMV5 832 aa15.87■□□□□ 0.13
COMMD6-211ENST00000486516 C1QBPQ07021 282 aaKnown RBP15.67■□□□□ 0.1
COMMD6-211ENST00000486516 CNKSR2Q8WXI2 1034 aa15.64■□□□□ 0.09
COMMD6-211ENST00000486516 RNF216Q9NWF9 866 aaPredicted RBP15.63■□□□□ 0.09
COMMD6-211ENST00000486516 DNAJC5BQ9UF47 199 aa15.35■□□□□ 0.05
COMMD6-211ENST00000486516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.19■□□□□ 0.02
COMMD6-211ENST00000486516 POTEHQ6S545 545 aa15.02■□□□□ -0
COMMD6-211ENST00000486516 NCBP3Q53F19 620 aaKnown RBP14.99□□□□□ -0.01
COMMD6-211ENST00000486516 NPM3O75607 178 aaKnown RBP14.89□□□□□ -0.03
COMMD6-211ENST00000486516 U3KPZ7 1027 aaPredicted RBP14.85□□□□□ -0.03
COMMD6-211ENST00000486516 SPINK5Q9NQ38 1064 aaPredicted RBP14.84□□□□□ -0.03
COMMD6-211ENST00000486516 DSG3P32926 999 aa14.82□□□□□ -0.04
COMMD6-211ENST00000486516 CAPN15O75808 1086 aa14.78□□□□□ -0.04
COMMD6-211ENST00000486516 ABCB7O75027 752 aa14.47□□□□□ -0.09
COMMD6-211ENST00000486516 TRHP20396 242 aaPredicted RBP14.44□□□□□ -0.1
COMMD6-211ENST00000486516 SLC4A2P04920 1241 aa14.4□□□□□ -0.1
COMMD6-211ENST00000486516 ZNF219Q9P2Y4 722 aaPredicted RBP14.28□□□□□ -0.12
COMMD6-211ENST00000486516 APLP2Q06481 763 aa14.19□□□□□ -0.14
COMMD6-211ENST00000486516 KCNA4P22459 653 aa14.16□□□□□ -0.14
COMMD6-211ENST00000486516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.07□□□□□ -0.16
COMMD6-211ENST00000486516 HNRNPUL2Q1KMD3 747 aaKnown RBP14.07□□□□□ -0.16
COMMD6-211ENST00000486516 CHRDL2Q6WN34 429 aa14.05□□□□□ -0.16
COMMD6-211ENST00000486516 RBM42Q9BTD8 480 aaKnown RBP14.05□□□□□ -0.16
COMMD6-211ENST00000486516 SAMD1Q6SPF0 538 aaPredicted RBP14.01□□□□□ -0.17
COMMD6-211ENST00000486516 POLA2Q14181 598 aa13.91□□□□□ -0.18
COMMD6-211ENST00000486516 SP7Q8TDD2 431 aaPredicted RBP13.81□□□□□ -0.2
COMMD6-211ENST00000486516 MYCNP04198 464 aaPredicted RBP13.72□□□□□ -0.21
COMMD6-211ENST00000486516 AKT1S1Q96B36 256 aa13.65□□□□□ -0.22
COMMD6-211ENST00000486516 PIP4P2Q8N4L2 257 aa13.63□□□□□ -0.23
COMMD6-211ENST00000486516 ATF5Q9Y2D1 282 aaPredicted RBP13.6□□□□□ -0.23
COMMD6-211ENST00000486516 REM2Q8IYK8 340 aaPredicted RBP13.59□□□□□ -0.23
COMMD6-211ENST00000486516 HAX1O00165 279 aa13.52□□□□□ -0.25
COMMD6-211ENST00000486516 OSCARQ8IYS5 282 aa13.52□□□□□ -0.25
COMMD6-211ENST00000486516 PITPNM1O00562 1244 aa13.47□□□□□ -0.25
COMMD6-211ENST00000486516 ZBTB12Q9Y330 459 aaPredicted RBP13.44□□□□□ -0.26
COMMD6-211ENST00000486516 FXR2P51116 673 aaKnown RBP eCLIP13.42□□□□□ -0.26
COMMD6-211ENST00000486516 EVX2Q03828 476 aa13.41□□□□□ -0.26
COMMD6-211ENST00000486516 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
COMMD6-211ENST00000486516 SLC4A1APQ9BWU0 796 aaKnown RBP13.2□□□□□ -0.3
COMMD6-211ENST00000486516 PRKAR2AP13861 404 aaKnown RBP13.1□□□□□ -0.31
COMMD6-211ENST00000486516 ZBTB22O15209 634 aa13.05□□□□□ -0.32
COMMD6-211ENST00000486516 SPDYE2BA6NHP3 402 aa13.04□□□□□ -0.32
COMMD6-211ENST00000486516 SPDYE6P0CI01 402 aa13.04□□□□□ -0.32
COMMD6-211ENST00000486516 SPDYE2Q495Y8 402 aa13.04□□□□□ -0.32
COMMD6-211ENST00000486516 CLEC11AQ9Y240 323 aa13.04□□□□□ -0.32
COMMD6-211ENST00000486516 C19orf67A6NJJ6 358 aa13.02□□□□□ -0.33
COMMD6-211ENST00000486516 GABBR2O75899 941 aa12.99□□□□□ -0.33
COMMD6-211ENST00000486516 LHX8Q68G74 356 aa12.96□□□□□ -0.33
COMMD6-211ENST00000486516 SPDYE1Q8NFV5 336 aaPredicted RBP12.95□□□□□ -0.34
COMMD6-211ENST00000486516 FBLN2P98095 1184 aa12.94□□□□□ -0.34
COMMD6-211ENST00000486516 MKRN4PQ13434 485 aaPredicted RBP12.91□□□□□ -0.34
COMMD6-211ENST00000486516 CHADLQ6NUI6 762 aa12.91□□□□□ -0.34
COMMD6-211ENST00000486516 ATXN8OSP0DMR3 200 aa12.87□□□□□ -0.35
COMMD6-211ENST00000486516 ZNF692Q9BU19 519 aaPredicted RBP12.84□□□□□ -0.35
COMMD6-211ENST00000486516 SSUH2Q9Y2M2 353 aa12.84□□□□□ -0.35
COMMD6-211ENST00000486516 POTEIP0CG38 1075 aa12.76□□□□□ -0.37
COMMD6-211ENST00000486516 PRR29P0C7W0 189 aa12.7□□□□□ -0.38
COMMD6-211ENST00000486516 PABPN1Q86U42 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
COMMD6-211ENST00000486516 CD44P16070 742 aaKnown RBP12.64□□□□□ -0.39
COMMD6-211ENST00000486516 PLSCR2Q9NRY7 297 aa12.64□□□□□ -0.39
COMMD6-211ENST00000486516 FARP1Q9Y4F1 1045 aaPredicted RBP12.57□□□□□ -0.4
COMMD6-211ENST00000486516 DCBLD2Q96PD2 775 aa12.48□□□□□ -0.41
COMMD6-211ENST00000486516 CLCN6P51797 869 aa12.39□□□□□ -0.43
COMMD6-211ENST00000486516 ZNF579Q8NAF0 562 aaKnown RBP12.39□□□□□ -0.43
COMMD6-211ENST00000486516 ZRANB1Q9UGI0 708 aa12.39□□□□□ -0.43
COMMD6-211ENST00000486516 GALR2O43603 387 aaPredicted RBP12.36□□□□□ -0.43
COMMD6-211ENST00000486516 OTUD5Q96G74 571 aa12.36□□□□□ -0.43
COMMD6-211ENST00000486516 POTEB2H3BUK9 544 aa12.35□□□□□ -0.43
COMMD6-211ENST00000486516 CREBZFQ9NS37 354 aa12.3□□□□□ -0.44
COMMD6-211ENST00000486516 POTEMA6NI47 508 aa12.24□□□□□ -0.45
COMMD6-211ENST00000486516 PHF12Q96QT6 1004 aa12.23□□□□□ -0.45
COMMD6-211ENST00000486516 PELP1Q8IZL8 1130 aaKnown RBP12.2□□□□□ -0.46
COMMD6-211ENST00000486516 POTEGQ6S5H5 508 aa12.19□□□□□ -0.46
COMMD6-211ENST00000486516 POTEJP0CG39 1038 aa12.09□□□□□ -0.47
COMMD6-211ENST00000486516 STAG3Q9UJ98 1225 aa12.08□□□□□ -0.48
COMMD6-211ENST00000486516 PAK3O75914 559 aaPredicted RBP12.07□□□□□ -0.48
COMMD6-211ENST00000486516 METRNQ9UJH8 293 aa12.04□□□□□ -0.48
COMMD6-211ENST00000486516 MNX1P50219 401 aaPredicted RBP12.02□□□□□ -0.49
COMMD6-211ENST00000486516 MS4A3Q96HJ5 214 aa12.02□□□□□ -0.49
COMMD6-211ENST00000486516 LCE2DQ5TA82 110 aaPredicted RBP12□□□□□ -0.49
COMMD6-211ENST00000486516 ATMINO43313 823 aaPredicted RBP11.99□□□□□ -0.49
COMMD6-211ENST00000486516 ASTLQ6HA08 431 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms