Protein–RNA interactions for Protein: Q01804

OTUD4, OTU domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4Q01804 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
OTUD4Q01804 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.61
OTUD4Q01804 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
OTUD4Q01804 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
OTUD4Q01804 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
OTUD4Q01804 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
OTUD4Q01804 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
OTUD4Q01804 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
OTUD4Q01804 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.83■□□□□ 0.6
OTUD4Q01804 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
OTUD4Q01804 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.83■□□□□ 0.6
OTUD4Q01804 NAPSB-206ENST00000562112 1266 ntBASIC18.83■□□□□ 0.6
OTUD4Q01804 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
OTUD4Q01804 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
OTUD4Q01804 MIR3180-4-201ENST00000582223 153 ntBASIC18.83■□□□□ 0.6
OTUD4Q01804 AC010240.3-201ENST00000607688 395 ntBASIC18.83■□□□□ 0.6
OTUD4Q01804 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
OTUD4Q01804 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
OTUD4Q01804 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
OTUD4Q01804 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
OTUD4Q01804 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
OTUD4Q01804 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.83■□□□□ 0.6
OTUD4Q01804 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
OTUD4Q01804 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.83■□□□□ 0.6
OTUD4Q01804 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
OTUD4Q01804 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
OTUD4Q01804 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OTUD4Q01804 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OTUD4Q01804 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OTUD4Q01804 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.82■□□□□ 0.6
OTUD4Q01804 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
OTUD4Q01804 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.82■□□□□ 0.6
OTUD4Q01804 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
OTUD4Q01804 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
OTUD4Q01804 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OTUD4Q01804 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OTUD4Q01804 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.82■□□□□ 0.6
OTUD4Q01804 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OTUD4Q01804 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OTUD4Q01804 MMP23A-201ENST00000234610 1017 ntBASIC18.82■□□□□ 0.6
OTUD4Q01804 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
OTUD4Q01804 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OTUD4Q01804 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
OTUD4Q01804 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.82■□□□□ 0.6
OTUD4Q01804 AC009947.2-201ENST00000444014 672 ntBASIC18.82■□□□□ 0.6
OTUD4Q01804 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.82■□□□□ 0.6
OTUD4Q01804 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
OTUD4Q01804 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.82■□□□□ 0.6
OTUD4Q01804 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OTUD4Q01804 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.82■□□□□ 0.6
OTUD4Q01804 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.82■□□□□ 0.6
OTUD4Q01804 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OTUD4Q01804 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OTUD4Q01804 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
OTUD4Q01804 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
OTUD4Q01804 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OTUD4Q01804 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OTUD4Q01804 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.82■□□□□ 0.6
OTUD4Q01804 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
OTUD4Q01804 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.82■□□□□ 0.6
OTUD4Q01804 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.82■□□□□ 0.6
OTUD4Q01804 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
OTUD4Q01804 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.82■□□□□ 0.6
OTUD4Q01804 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.82■□□□□ 0.6
OTUD4Q01804 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.82■□□□□ 0.6
OTUD4Q01804 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
OTUD4Q01804 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
OTUD4Q01804 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
OTUD4Q01804 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.81■□□□□ 0.6
OTUD4Q01804 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
OTUD4Q01804 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.81■□□□□ 0.6
OTUD4Q01804 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.81■□□□□ 0.6
OTUD4Q01804 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTUD4Q01804 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTUD4Q01804 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
OTUD4Q01804 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
OTUD4Q01804 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
OTUD4Q01804 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTUD4Q01804 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
OTUD4Q01804 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
OTUD4Q01804 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTUD4Q01804 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
OTUD4Q01804 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTUD4Q01804 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.81■□□□□ 0.6
OTUD4Q01804 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
OTUD4Q01804 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTUD4Q01804 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTUD4Q01804 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
OTUD4Q01804 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.81■□□□□ 0.6
OTUD4Q01804 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.81■□□□□ 0.6
OTUD4Q01804 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
OTUD4Q01804 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTUD4Q01804 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTUD4Q01804 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
OTUD4Q01804 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTUD4Q01804 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.81■□□□□ 0.6
OTUD4Q01804 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTUD4Q01804 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTUD4Q01804 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTUD4Q01804 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms