Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.75□□□□□ -0.21
HIST1H2BDP58876 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 AC079328.2-201ENST00000561241 3354 ntBASIC13.74□□□□□ -0.21
HIST1H2BDP58876 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H2BDP58876 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 AC097381.1-201ENST00000429019 1296 ntBASIC13.73□□□□□ -0.21
HIST1H2BDP58876 AC092171.4-201ENST00000609130 632 ntBASIC13.73□□□□□ -0.21
HIST1H2BDP58876 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 MTMR9LP-203ENST00000426597 1545 ntBASIC13.73□□□□□ -0.21
HIST1H2BDP58876 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
HIST1H2BDP58876 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 MIR7108-201ENST00000614319 87 ntBASIC13.72□□□□□ -0.21
HIST1H2BDP58876 BRD4-212ENST00000630599 726 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms