Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VSX2P58304 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VSX2P58304 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VSX2P58304 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.43■□□□□ 0.38
VSX2P58304 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.42■□□□□ 0.38
VSX2P58304 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
VSX2P58304 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VSX2P58304 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.42■□□□□ 0.38
VSX2P58304 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VSX2P58304 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.42■□□□□ 0.38
VSX2P58304 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
VSX2P58304 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
VSX2P58304 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VSX2P58304 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.42■□□□□ 0.38
VSX2P58304 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VSX2P58304 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VSX2P58304 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.42■□□□□ 0.38
VSX2P58304 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VSX2P58304 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VSX2P58304 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VSX2P58304 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
VSX2P58304 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VSX2P58304 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.42■□□□□ 0.38
VSX2P58304 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VSX2P58304 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VSX2P58304 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.42■□□□□ 0.38
VSX2P58304 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.42■□□□□ 0.38
VSX2P58304 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.42■□□□□ 0.38
VSX2P58304 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.42■□□□□ 0.38
VSX2P58304 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.42■□□□□ 0.38
VSX2P58304 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.42■□□□□ 0.38
VSX2P58304 AL121672.3-201ENST00000608644 468 ntBASIC17.42■□□□□ 0.38
VSX2P58304 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.42■□□□□ 0.38
VSX2P58304 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
VSX2P58304 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VSX2P58304 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.42■□□□□ 0.38
VSX2P58304 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VSX2P58304 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VSX2P58304 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VSX2P58304 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VSX2P58304 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VSX2P58304 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
VSX2P58304 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.42■□□□□ 0.38
VSX2P58304 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.42■□□□□ 0.38
VSX2P58304 AC073592.3-201ENST00000625118 1834 ntBASIC17.42■□□□□ 0.38
VSX2P58304 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VSX2P58304 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
VSX2P58304 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.42■□□□□ 0.38
VSX2P58304 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
VSX2P58304 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VSX2P58304 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VSX2P58304 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.41■□□□□ 0.38
VSX2P58304 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VSX2P58304 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
VSX2P58304 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VSX2P58304 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
VSX2P58304 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VSX2P58304 IGHGP-201ENST00000390555 1178 ntBASIC17.41■□□□□ 0.38
VSX2P58304 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VSX2P58304 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.41■□□□□ 0.38
VSX2P58304 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.41■□□□□ 0.38
VSX2P58304 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.41■□□□□ 0.38
VSX2P58304 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.41■□□□□ 0.38
VSX2P58304 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
VSX2P58304 GPR32P1-201ENST00000601788 811 ntBASIC17.41■□□□□ 0.38
VSX2P58304 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
VSX2P58304 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
VSX2P58304 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.41■□□□□ 0.38
VSX2P58304 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VSX2P58304 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VSX2P58304 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VSX2P58304 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VSX2P58304 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VSX2P58304 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.41■□□□□ 0.38
VSX2P58304 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VSX2P58304 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VSX2P58304 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VSX2P58304 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VSX2P58304 GMCL1P1-201ENST00000463439 1581 ntBASIC17.4■□□□□ 0.38
VSX2P58304 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VSX2P58304 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VSX2P58304 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VSX2P58304 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VSX2P58304 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.4■□□□□ 0.38
VSX2P58304 LINC01126-201ENST00000623515 1646 ntBASIC17.4■□□□□ 0.38
VSX2P58304 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VSX2P58304 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VSX2P58304 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.4■□□□□ 0.38
VSX2P58304 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VSX2P58304 KRT89P-201ENST00000620027 1478 ntBASIC17.4■□□□□ 0.38
VSX2P58304 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VSX2P58304 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VSX2P58304 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VSX2P58304 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VSX2P58304 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.4■□□□□ 0.38
VSX2P58304 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.4■□□□□ 0.38
VSX2P58304 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VSX2P58304 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VSX2P58304 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.4■□□□□ 0.38
VSX2P58304 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms