Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 SAP30L-AS1-204ENST00000524264 1039 ntTSL 1 (best) BASIC8.24□□□□□ -1.096e-6■■□□□ 11.7
NCBP2P52298 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.16e-6■■□□□ 11.7
NCBP2P52298 PKP4-207ENST00000457109 520 ntTSL 38□□□□□ -1.136e-6■■□□□ 11.7
NCBP2P52298 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.156e-6■■□□□ 11.7
NCBP2P52298 HPS4-206ENST00000439453 3936 ntTSL 1 (best)7.88□□□□□ -1.156e-6■■□□□ 11.7
NCBP2P52298 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC7.87□□□□□ -1.156e-6■■□□□ 11.7
NCBP2P52298 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.52□□□□□ -1.216e-6■■□□□ 11.7
NCBP2P52298 GDAP1-203ENST00000520797 735 ntTSL 37.39□□□□□ -1.236e-6■■□□□ 11.7
NCBP2P52298 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.21□□□□□ -1.266e-6■■□□□ 11.7
NCBP2P52298 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.456e-6■■□□□ 11.7
NCBP2P52298 GOLGA8B-206ENST00000566091 529 ntTSL 55.95□□□□□ -1.466e-6■■□□□ 11.7
NCBP2P52298 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.526e-6■■□□□ 11.7
NCBP2P52298 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.596e-6■■□□□ 11.7
NCBP2P52298 RUFY3-206ENST00000503876 531 ntTSL 44□□□□□ -1.776e-6■■□□□ 11.7
NCBP2P52298 DCUN1D4-204ENST00000477560 4840 ntTSL 23.7□□□□□ -1.829e-11■■□□□ 11.7
NCBP2P52298 PACRGL-205ENST00000471979 1394 ntTSL 23.62□□□□□ -1.836e-6■■□□□ 11.7
NCBP2P52298 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.416e-7■■□□□ 11.7
NCBP2P52298 RUNDC1-203ENST00000590836 1439 nt24.81■■□□□ 1.564e-7■■□□□ 11.7
NCBP2P52298 RUNDC1-202ENST00000589705 959 ntTSL 523.87■■□□□ 1.414e-7■■□□□ 11.7
NCBP2P52298 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.154e-7■■□□□ 11.7
NCBP2P52298 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.961e-7■■□□□ 11.7
NCBP2P52298 HUWE1-205ENST00000446750 872 ntTSL 519.88■□□□□ 0.772e-10■■□□□ 11.7
NCBP2P52298 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.322e-10■■□□□ 11.7
NCBP2P52298 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.62□□□□□ -0.075e-21■■□□□ 11.7
NCBP2P52298 OXA1L-204ENST00000431881 889 ntTSL 314.52□□□□□ -0.095e-21■■□□□ 11.7
NCBP2P52298 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.18□□□□□ -0.145e-21■■□□□ 11.7
NCBP2P52298 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.77□□□□□ -0.215e-21■■□□□ 11.7
NCBP2P52298 OXA1L-205ENST00000442110 691 ntTSL 513.69□□□□□ -0.225e-21■■□□□ 11.7
NCBP2P52298 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.365e-21■■□□□ 11.7
NCBP2P52298 OXA1L-208ENST00000483939 1224 ntTSL 212.06□□□□□ -0.485e-21■■□□□ 11.7
NCBP2P52298 OXA1L-209ENST00000495424 1679 ntTSL 211.52□□□□□ -0.575e-21■■□□□ 11.7
NCBP2P52298 OXA1L-206ENST00000473744 824 ntTSL 310.15□□□□□ -0.785e-21■■□□□ 11.7
NCBP2P52298 OXA1L-211ENST00000557299 538 ntTSL 210.08□□□□□ -0.85e-21■■□□□ 11.7
NCBP2P52298 OXA1L-213ENST00000612549 2971 ntTSL 1 (best) BASIC7.88□□□□□ -1.155e-21■■□□□ 11.7
NCBP2P52298 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.41■□□□□ 0.389e-9■■□□□ 11.7
NCBP2P52298 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.219e-9■■□□□ 11.7
NCBP2P52298 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.15■□□□□ 0.182e-8■■□□□ 11.7
NCBP2P52298 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.22□□□□□ -0.132e-8■■□□□ 11.7
NCBP2P52298 ASPH-205ENST00000445642 3717 ntTSL 2 BASIC12.03□□□□□ -0.482e-8■■□□□ 11.7
NCBP2P52298 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.52e-8■■□□□ 11.7
NCBP2P52298 ASPH-208ENST00000517856 6337 ntTSL 2 BASIC11.89□□□□□ -0.512e-8■■□□□ 11.7
NCBP2P52298 ASPH-201ENST00000356457 3730 ntTSL 1 (best) BASIC11.08□□□□□ -0.642e-8■■□□□ 11.7
NCBP2P52298 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.462e-7■■□□□ 11.7
NCBP2P52298 ANAPC7-204ENST00000464697 734 ntTSL 310.75□□□□□ -0.692e-7■■□□□ 11.7
NCBP2P52298 ANAPC7-201ENST00000450008 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.72e-7■■□□□ 11.7
NCBP2P52298 ANAPC7-212ENST00000552170 579 ntTSL 49.45□□□□□ -0.92e-7■■□□□ 11.7
NCBP2P52298 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.9□□□□□ -1.632e-7■■□□□ 11.7
NCBP2P52298 TOPORS-201ENST00000360538 4098 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.623e-7■■□□□ 11.7
NCBP2P52298 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.233e-7■■□□□ 11.7
NCBP2P52298 GPX4-202ENST00000585362 859 ntTSL 224.08■■□□□ 1.453e-6■■□□□ 11.7
NCBP2P52298 GPX4-211ENST00000614791 431 ntTSL 321.39■■□□□ 1.013e-6■■□□□ 11.7
NCBP2P52298 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.9■□□□□ 0.943e-6■■□□□ 11.7
NCBP2P52298 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.32■□□□□ 0.363e-6■■□□□ 11.7
NCBP2P52298 GPX4-209ENST00000593032 583 ntTSL 317.19■□□□□ 0.343e-6■■□□□ 11.7
NCBP2P52298 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.263e-6■■□□□ 11.7
NCBP2P52298 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.28■□□□□ 0.23e-6■■□□□ 11.7
NCBP2P52298 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.123e-6■■□□□ 11.7
NCBP2P52298 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.52□□□□□ -0.093e-6■■□□□ 11.7
NCBP2P52298 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.327e-9■■□□□ 11.7
NCBP2P52298 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.34■□□□□ 0.851e-10■■□□□ 11.7
NCBP2P52298 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.031e-10■■□□□ 11.7
NCBP2P52298 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.471e-10■■□□□ 11.7
NCBP2P52298 SNRK-202ENST00000429705 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.511e-10■■□□□ 11.7
NCBP2P52298 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.812e-8■■□□□ 11.7
NCBP2P52298 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.422e-8■■□□□ 11.7
NCBP2P52298 SPIRE2-206ENST00000564878 663 ntTSL 316.43■□□□□ 0.222e-8■■□□□ 11.7
NCBP2P52298 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.495e-10■■□□□ 11.7
NCBP2P52298 TSG101-203ENST00000535077 685 ntTSL 318■□□□□ 0.475e-10■■□□□ 11.7
NCBP2P52298 TSG101-210ENST00000545247 783 ntTSL 317.22■□□□□ 0.355e-10■■□□□ 11.7
NCBP2P52298 TSG101-202ENST00000438874 581 ntTSL 1 (best)16.96■□□□□ 0.315e-10■■□□□ 11.7
NCBP2P52298 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.82□□□□□ -0.045e-10■■□□□ 11.7
NCBP2P52298 TSG101-209ENST00000544804 391 ntTSL 313.71□□□□□ -0.215e-10■■□□□ 11.7
NCBP2P52298 TSG101-206ENST00000542488 304 ntTSL 51.49□□□□□ -2.175e-10■■□□□ 11.7
NCBP2P52298 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.71■□□□□ 0.594e-25■■□□□ 11.6
NCBP2P52298 PHACTR4-205ENST00000632202 918 ntTSL 513.33□□□□□ -0.288e-7■■□□□ 11.6
NCBP2P52298 PHACTR4-209ENST00000633371 597 ntTSL 313.32□□□□□ -0.288e-7■■□□□ 11.6
NCBP2P52298 PHACTR4-203ENST00000463428 1421 ntTSL 1 (best)12.97□□□□□ -0.338e-7■■□□□ 11.6
NCBP2P52298 PHACTR4-206ENST00000632421 3375 ntTSL 211.58□□□□□ -0.568e-7■■□□□ 11.6
NCBP2P52298 PHACTR4-202ENST00000373839 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.678e-7■■□□□ 11.6
NCBP2P52298 PHACTR4-204ENST00000493669 3078 ntTSL 1 (best)10.22□□□□□ -0.778e-7■■□□□ 11.6
NCBP2P52298 WIPF2-203ENST00000494757 2113 ntTSL 1 (best)20.18■□□□□ 0.821e-6■■□□□ 11.6
NCBP2P52298 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.561e-6■■□□□ 11.6
NCBP2P52298 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.261e-6■■□□□ 11.6
NCBP2P52298 WIPF2-206ENST00000582781 3163 ntTSL 1 (best)14.16□□□□□ -0.141e-6■■□□□ 11.6
NCBP2P52298 WIPF2-201ENST00000323571 7474 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.741e-6■■□□□ 11.6
NCBP2P52298 WIPF2-208ENST00000583268 581 ntTSL 39.92□□□□□ -0.821e-6■■□□□ 11.6
NCBP2P52298 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.221e-7■■□□□ 11.6
NCBP2P52298 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.79□□□□□ -0.21e-7■■□□□ 11.6
NCBP2P52298 NOL4L-204ENST00000375677 541 ntTSL 310.92□□□□□ -0.661e-7■■□□□ 11.6
NCBP2P52298 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.083e-10■■□□□ 11.6
NCBP2P52298 RPAIN-210ENST00000571613 1688 ntTSL 218.38■□□□□ 0.533e-8■■□□□ 11.6
NCBP2P52298 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.213e-8■■□□□ 11.6
NCBP2P52298 RPAIN-208ENST00000571043 1547 ntTSL 216.35■□□□□ 0.213e-8■■□□□ 11.6
NCBP2P52298 RPAIN-206ENST00000539417 1471 ntTSL 214.57□□□□□ -0.083e-8■■□□□ 11.6
NCBP2P52298 RPAIN-217ENST00000575711 732 ntTSL 213.04□□□□□ -0.323e-8■■□□□ 11.6
NCBP2P52298 RPAIN-211ENST00000572174 597 ntTSL 212.9□□□□□ -0.343e-8■■□□□ 11.6
NCBP2P52298 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC12.82□□□□□ -0.363e-8■■□□□ 11.6
NCBP2P52298 RPAIN-209ENST00000571558 1423 ntTSL 212.76□□□□□ -0.373e-8■■□□□ 11.6
NCBP2P52298 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC12.56□□□□□ -0.43e-8■■□□□ 11.6
NCBP2P52298 RPAIN-213ENST00000573577 1282 ntTSL 212.56□□□□□ -0.43e-8■■□□□ 11.6
Retrieved 100 of 18,329 protein–RNA pairs in 220.1 ms