RNA–Protein interactions for RNA: ENST00000327040.12

PSD3-202, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PSD3, Length 11,689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-202ENST00000327040 NISCHQ9Y2I1 1504 aa12.89□□□□□ -0.35
PSD3-202ENST00000327040 CCDC180Q9P1Z9 1646 aa11.47□□□□□ -0.57
PSD3-202ENST00000327040 ZCCHC6Q5VYS8 1495 aaKnown RBP10.88□□□□□ -0.67
PSD3-202ENST00000327040 DCAF1Q9Y4B6 1507 aa10.8□□□□□ -0.68
PSD3-202ENST00000327040 MYO15BQ96JP2 1530 aa10.62□□□□□ -0.71
PSD3-202ENST00000327040 DCAF8L2P0C7V8 631 aa10.6□□□□□ -0.71
PSD3-202ENST00000327040 SHROOM4Q9ULL8 1493 aa10.59□□□□□ -0.71
PSD3-202ENST00000327040 NACADO15069 1562 aa10.51□□□□□ -0.73
PSD3-202ENST00000327040 SUPT5HO00267 1087 aaKnown RBP10.45□□□□□ -0.74
PSD3-202ENST00000327040 ABCC9O60706 1549 aa10.39□□□□□ -0.75
PSD3-202ENST00000327040 RB1CC1Q8TDY2 1594 aa10.38□□□□□ -0.75
PSD3-202ENST00000327040 SCRIBQ14160 1630 aa10.33□□□□□ -0.76
PSD3-202ENST00000327040 BAZ1AQ9NRL2 1556 aaPredicted RBP10.13□□□□□ -0.79
PSD3-202ENST00000327040 UNC13AQ9UPW8 1703 aa10.11□□□□□ -0.79
PSD3-202ENST00000327040 CHIC1Q5VXU3 224 aa10.04□□□□□ -0.8
PSD3-202ENST00000327040 RSF1Q96T23 1441 aaPredicted RBP9.99□□□□□ -0.81
PSD3-202ENST00000327040 SMARCA4P51532 1647 aa9.97□□□□□ -0.81
PSD3-202ENST00000327040 TRIM41Q8WV44 630 aa9.97□□□□□ -0.81
PSD3-202ENST00000327040 TOP2AP11388 1531 aaKnown RBP9.93□□□□□ -0.82
PSD3-202ENST00000327040 SMARCA2P51531 1590 aa9.89□□□□□ -0.83
PSD3-202ENST00000327040 WIZO95785 1651 aa9.89□□□□□ -0.83
PSD3-202ENST00000327040 ZEB1P37275 1124 aaPredicted RBP9.89□□□□□ -0.83
PSD3-202ENST00000327040 EEA1Q15075 1411 aa9.85□□□□□ -0.83
PSD3-202ENST00000327040 PRDM2Q13029 1718 aa9.83□□□□□ -0.84
PSD3-202ENST00000327040 MROH2BQ7Z745 1585 aa9.82□□□□□ -0.84
PSD3-202ENST00000327040 PEG3Q9GZU2 1588 aa9.8□□□□□ -0.84
PSD3-202ENST00000327040 TRIM26Q12899 539 aaPredicted RBP9.78□□□□□ -0.84
PSD3-202ENST00000327040 BAZ1BQ9UIG0 1483 aaKnown RBP9.75□□□□□ -0.85
PSD3-202ENST00000327040 CECR2Q9BXF3 1484 aa9.74□□□□□ -0.85
PSD3-202ENST00000327040 PCGF6Q9BYE7 350 aa9.72□□□□□ -0.85
PSD3-202ENST00000327040 APLP2Q06481 763 aa9.69□□□□□ -0.86
PSD3-202ENST00000327040 HRCP23327 699 aa9.68□□□□□ -0.86
PSD3-202ENST00000327040 HMGXB3Q12766 1538 aa9.67□□□□□ -0.86
PSD3-202ENST00000327040 BICRAQ9NZM4 1560 aa9.65□□□□□ -0.86
PSD3-202ENST00000327040 EIF4G1Q04637 1599 aaKnown RBP9.64□□□□□ -0.87
PSD3-202ENST00000327040 CCDC88BA6NC98 1476 aa9.64□□□□□ -0.87
PSD3-202ENST00000327040 GOLGA3Q08378 1498 aa9.61□□□□□ -0.87
PSD3-202ENST00000327040 KIF21BO75037 1637 aa9.6□□□□□ -0.87
PSD3-202ENST00000327040 CEP164Q9UPV0 1460 aa9.6□□□□□ -0.87
PSD3-202ENST00000327040 WRNQ14191 1432 aaPredicted RBP eCLIP9.6□□□□□ -0.87
PSD3-202ENST00000327040 FAM9AQ8IZU1 332 aaPredicted RBP9.59□□□□□ -0.87
PSD3-202ENST00000327040 UBTFP17480 764 aaKnown RBP9.56□□□□□ -0.88
PSD3-202ENST00000327040 ATAD2BQ9ULI0 1458 aa9.55□□□□□ -0.88
PSD3-202ENST00000327040 TOP2BQ02880 1626 aa9.54□□□□□ -0.88
PSD3-202ENST00000327040 ABCC8Q09428 1581 aa9.54□□□□□ -0.88
PSD3-202ENST00000327040 BIVM-ERCC5R4GMW8 1640 aa9.54□□□□□ -0.88
PSD3-202ENST00000327040 LOC105371045A0A1W2PR82 267 aa9.53□□□□□ -0.88
PSD3-202ENST00000327040 TNIKQ9UKE5 1360 aa9.52□□□□□ -0.89
PSD3-202ENST00000327040 PABPN1Q86U42 306 aaKnown RBP eCLIP9.51□□□□□ -0.89
PSD3-202ENST00000327040 ERICH3Q5RHP9 1530 aa9.5□□□□□ -0.89
PSD3-202ENST00000327040 CEP162Q5TB80 1403 aa9.48□□□□□ -0.89
PSD3-202ENST00000327040 CSRNP3Q8WYN3 585 aa9.48□□□□□ -0.89
PSD3-202ENST00000327040 NCAPD3P42695 1498 aa9.47□□□□□ -0.89
PSD3-202ENST00000327040 KIF27Q86VH2 1401 aa9.46□□□□□ -0.9
PSD3-202ENST00000327040 CLIP1P30622 1438 aa9.44□□□□□ -0.9
PSD3-202ENST00000327040 CCER1Q8TC90 406 aaPredicted RBP9.42□□□□□ -0.9
PSD3-202ENST00000327040 SYNJ1O43426 1573 aa9.42□□□□□ -0.9
PSD3-202ENST00000327040 CUL7Q14999 1698 aa9.38□□□□□ -0.91
PSD3-202ENST00000327040 KIF21AQ7Z4S6 1674 aa9.37□□□□□ -0.91
PSD3-202ENST00000327040 VPS8Q8N3P4 1428 aa9.36□□□□□ -0.91
PSD3-202ENST00000327040 EHMT2Q96KQ7 1210 aa9.36□□□□□ -0.91
PSD3-202ENST00000327040 CFTRP13569 1480 aa9.36□□□□□ -0.91
PSD3-202ENST00000327040 CC2D2AQ9P2K1 1620 aa9.35□□□□□ -0.91
PSD3-202ENST00000327040 CTTNBP2Q8WZ74 1663 aa9.34□□□□□ -0.91
PSD3-202ENST00000327040 CENPBP07199 599 aaPredicted RBP9.33□□□□□ -0.92
PSD3-202ENST00000327040 FHAD1B1AJZ9 1412 aa9.32□□□□□ -0.92
PSD3-202ENST00000327040 SOGA1O94964 1423 aa9.32□□□□□ -0.92
PSD3-202ENST00000327040 LAMC3Q9Y6N6 1575 aa9.32□□□□□ -0.92
PSD3-202ENST00000327040 DNMBPQ6XZF7 1577 aa9.3□□□□□ -0.92
PSD3-202ENST00000327040 ACIN1Q9UKV3 1341 aaKnown RBP9.3□□□□□ -0.92
PSD3-202ENST00000327040 CLSPNQ9HAW4 1339 aa9.29□□□□□ -0.92
PSD3-202ENST00000327040 PELP1Q8IZL8 1130 aaKnown RBP9.29□□□□□ -0.92
PSD3-202ENST00000327040 EFCAB5A4FU69 1503 aa9.28□□□□□ -0.92
PSD3-202ENST00000327040 CADPSQ9ULU8 1353 aa9.27□□□□□ -0.92
PSD3-202ENST00000327040 PPARGC1BQ86YN6 1023 aaKnown RBP9.25□□□□□ -0.93
PSD3-202ENST00000327040 PDS5BQ9NTI5 1447 aa9.24□□□□□ -0.93
PSD3-202ENST00000327040 WDR97A6NE52 1622 aa9.23□□□□□ -0.93
PSD3-202ENST00000327040 CUX1P39880 1505 aa9.23□□□□□ -0.93
PSD3-202ENST00000327040 RAPGEF2Q9Y4G8 1499 aa9.23□□□□□ -0.93
PSD3-202ENST00000327040 MAP3K1Q13233 1512 aa9.22□□□□□ -0.93
PSD3-202ENST00000327040 CFAP43Q8NDM7 1665 aa9.22□□□□□ -0.93
PSD3-202ENST00000327040 CUX2O14529 1486 aa9.22□□□□□ -0.93
PSD3-202ENST00000327040 FANCD2Q9BXW9 1451 aa9.2□□□□□ -0.94
PSD3-202ENST00000327040 PRXQ9BXM0 1461 aa9.2□□□□□ -0.94
PSD3-202ENST00000327040 FMN1Q68DA7 1419 aa9.19□□□□□ -0.94
PSD3-202ENST00000327040 THOC2Q8NI27 1593 aaKnown RBP9.18□□□□□ -0.94
PSD3-202ENST00000327040 FGD5Q6ZNL6 1462 aa9.18□□□□□ -0.94
PSD3-202ENST00000327040 ABCA10Q8WWZ4 1543 aa9.16□□□□□ -0.94
PSD3-202ENST00000327040 FYCO1Q9BQS8 1478 aa9.16□□□□□ -0.94
PSD3-202ENST00000327040 SUPT6HQ7KZ85 1726 aaKnown RBP9.16□□□□□ -0.94
PSD3-202ENST00000327040 PBRM1Q86U86 1689 aa9.15□□□□□ -0.94
PSD3-202ENST00000327040 CARMIL1Q5VZK9 1371 aa9.15□□□□□ -0.94
PSD3-202ENST00000327040 TIAM1Q13009 1591 aa9.14□□□□□ -0.95
PSD3-202ENST00000327040 TTBK1Q5TCY1 1321 aaPredicted RBP9.13□□□□□ -0.95
PSD3-202ENST00000327040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.13□□□□□ -0.95
PSD3-202ENST00000327040 RUSC2Q8N2Y8 1516 aa9.12□□□□□ -0.95
PSD3-202ENST00000327040 TOPBP1Q92547 1522 aa9.12□□□□□ -0.95
PSD3-202ENST00000327040 AQRO60306 1485 aaKnown RBP eCLIP9.12□□□□□ -0.95
PSD3-202ENST00000327040 CCDC18Q5T9S5 1454 aa9.12□□□□□ -0.95
PSD3-202ENST00000327040 ARHGAP35Q9NRY4 1499 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms