Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
PCP4P48539 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.52□□□□□ -0.4
PCP4P48539 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
PCP4P48539 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
PCP4P48539 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.4
PCP4P48539 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.52□□□□□ -0.4
PCP4P48539 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PCP4P48539 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
PCP4P48539 AC027601.5-201ENST00000624065 2482 ntBASIC12.52□□□□□ -0.4
PCP4P48539 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
PCP4P48539 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
PCP4P48539 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
PCP4P48539 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
PCP4P48539 AC097376.2-205ENST00000610159 5334 ntBASIC12.52□□□□□ -0.4
PCP4P48539 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC12.52□□□□□ -0.4
PCP4P48539 TP73-202ENST00000354437 2140 ntTSL 5 BASIC12.52□□□□□ -0.4
PCP4P48539 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
PCP4P48539 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCP4P48539 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCP4P48539 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC12.52□□□□□ -0.41
PCP4P48539 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
PCP4P48539 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCP4P48539 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCP4P48539 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
PCP4P48539 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
PCP4P48539 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCP4P48539 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
PCP4P48539 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.52□□□□□ -0.41
PCP4P48539 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
PCP4P48539 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
PCP4P48539 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCP4P48539 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PCP4P48539 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCP4P48539 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCP4P48539 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCP4P48539 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCP4P48539 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PCP4P48539 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCP4P48539 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PCP4P48539 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
PCP4P48539 AC015909.5-201ENST00000624336 2266 ntBASIC12.51□□□□□ -0.41
PCP4P48539 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.51□□□□□ -0.41
PCP4P48539 AC027612.1-201ENST00000445234 2395 ntBASIC12.51□□□□□ -0.41
PCP4P48539 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.51□□□□□ -0.41
PCP4P48539 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCP4P48539 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCP4P48539 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
PCP4P48539 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCP4P48539 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCP4P48539 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCP4P48539 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC12.51□□□□□ -0.41
PCP4P48539 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PCP4P48539 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PCP4P48539 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCP4P48539 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCP4P48539 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCP4P48539 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
PCP4P48539 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PCP4P48539 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PCP4P48539 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCP4P48539 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
PCP4P48539 AL023806.1-201ENST00000603994 1649 ntBASIC12.51□□□□□ -0.41
PCP4P48539 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.51□□□□□ -0.41
PCP4P48539 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCP4P48539 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCP4P48539 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC12.51□□□□□ -0.41
PCP4P48539 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC12.51□□□□□ -0.41
PCP4P48539 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCP4P48539 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC12.51□□□□□ -0.41
PCP4P48539 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCP4P48539 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PCP4P48539 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PCP4P48539 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PCP4P48539 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.5□□□□□ -0.41
PCP4P48539 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.5□□□□□ -0.41
PCP4P48539 AC006449.6-201ENST00000612330 2296 ntBASIC12.5□□□□□ -0.41
PCP4P48539 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCP4P48539 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.5□□□□□ -0.41
PCP4P48539 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
PCP4P48539 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
PCP4P48539 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCP4P48539 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC12.5□□□□□ -0.41
PCP4P48539 ACE-204ENST00000428043 5120 ntTSL 2 BASIC12.5□□□□□ -0.41
PCP4P48539 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCP4P48539 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
PCP4P48539 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
PCP4P48539 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PCP4P48539 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCP4P48539 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCP4P48539 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCP4P48539 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCP4P48539 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.5□□□□□ -0.41
PCP4P48539 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCP4P48539 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
PCP4P48539 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC12.5□□□□□ -0.41
PCP4P48539 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCP4P48539 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PCP4P48539 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC12.5□□□□□ -0.41
PCP4P48539 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
PCP4P48539 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms