Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC122714.2-201ENST00000502787 707 ntBASIC20.68■□□□□ 0.9
TM4SF4P48230 IGHV3-65-201ENST00000523210 341 ntBASIC20.68■□□□□ 0.9
TM4SF4P48230 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.68■□□□□ 0.9
TM4SF4P48230 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.68■□□□□ 0.9
TM4SF4P48230 AC093512.1-201ENST00000617969 520 ntBASIC20.68■□□□□ 0.9
TM4SF4P48230 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF4P48230 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF4P48230 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TM4SF4P48230 KRT8P47-201ENST00000604727 1398 ntBASIC20.68■□□□□ 0.9
TM4SF4P48230 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF4P48230 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.68■□□□□ 0.9
TM4SF4P48230 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF4P48230 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF4P48230 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TM4SF4P48230 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF4P48230 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TM4SF4P48230 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.67■□□□□ 0.9
TM4SF4P48230 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF4P48230 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.67■□□□□ 0.9
TM4SF4P48230 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF4P48230 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF4P48230 ACTG1P14-201ENST00000446382 1122 ntBASIC20.67■□□□□ 0.9
TM4SF4P48230 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.67■□□□□ 0.9
TM4SF4P48230 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.67■□□□□ 0.9
TM4SF4P48230 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.67■□□□□ 0.9
TM4SF4P48230 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TM4SF4P48230 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TM4SF4P48230 AC008667.4-201ENST00000607370 168 ntBASIC20.67■□□□□ 0.9
TM4SF4P48230 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.67■□□□□ 0.9
TM4SF4P48230 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TM4SF4P48230 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.67■□□□□ 0.9
TM4SF4P48230 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.67■□□□□ 0.9
TM4SF4P48230 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
TM4SF4P48230 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF4P48230 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF4P48230 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF4P48230 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.67■□□□□ 0.9
TM4SF4P48230 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF4P48230 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TM4SF4P48230 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM4SF4P48230 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TM4SF4P48230 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TM4SF4P48230 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.66■□□□□ 0.9
TM4SF4P48230 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TM4SF4P48230 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM4SF4P48230 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.66■□□□□ 0.9
TM4SF4P48230 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.66■□□□□ 0.9
TM4SF4P48230 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.66■□□□□ 0.9
TM4SF4P48230 PDPK2P-202ENST00000562415 1191 ntBASIC20.66■□□□□ 0.9
TM4SF4P48230 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.66■□□□□ 0.9
TM4SF4P48230 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.66■□□□□ 0.9
TM4SF4P48230 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.66■□□□□ 0.9
TM4SF4P48230 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM4SF4P48230 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.66■□□□□ 0.9
TM4SF4P48230 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TM4SF4P48230 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.66■□□□□ 0.9
TM4SF4P48230 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM4SF4P48230 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM4SF4P48230 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM4SF4P48230 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF4P48230 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF4P48230 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.65■□□□□ 0.9
TM4SF4P48230 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TM4SF4P48230 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF4P48230 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.65■□□□□ 0.9
TM4SF4P48230 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.65■□□□□ 0.9
TM4SF4P48230 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF4P48230 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.65■□□□□ 0.9
TM4SF4P48230 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
TM4SF4P48230 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.65■□□□□ 0.9
TM4SF4P48230 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.65■□□□□ 0.9
TM4SF4P48230 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
TM4SF4P48230 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF4P48230 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.65■□□□□ 0.9
TM4SF4P48230 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF4P48230 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF4P48230 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.65■□□□□ 0.9
TM4SF4P48230 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF4P48230 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF4P48230 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF4P48230 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF4P48230 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF4P48230 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.65■□□□□ 0.9
TM4SF4P48230 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.65■□□□□ 0.9
TM4SF4P48230 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TM4SF4P48230 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.65■□□□□ 0.9
TM4SF4P48230 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TM4SF4P48230 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.65■□□□□ 0.9
TM4SF4P48230 AC004449.1-201ENST00000564240 433 ntBASIC20.65■□□□□ 0.9
TM4SF4P48230 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC20.65■□□□□ 0.9
TM4SF4P48230 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.65■□□□□ 0.9
TM4SF4P48230 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF4P48230 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TM4SF4P48230 AC004790.2-201ENST00000623588 572 ntBASIC20.65■□□□□ 0.9
TM4SF4P48230 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.65■□□□□ 0.9
TM4SF4P48230 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF4P48230 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM4SF4P48230 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
TM4SF4P48230 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TM4SF4P48230 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms