Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIK1P39086 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIK1P39086 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIK1P39086 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIK1P39086 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIK1P39086 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GRIK1P39086 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIK1P39086 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.17■□□□□ 0.66
GRIK1P39086 TSPY12P-201ENST00000421279 868 ntBASIC19.17■□□□□ 0.66
GRIK1P39086 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.17■□□□□ 0.66
GRIK1P39086 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIK1P39086 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.17■□□□□ 0.66
GRIK1P39086 RN7SL606P-201ENST00000472779 293 ntBASIC19.17■□□□□ 0.66
GRIK1P39086 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.17■□□□□ 0.66
GRIK1P39086 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GRIK1P39086 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GRIK1P39086 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIK1P39086 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIK1P39086 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIK1P39086 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GRIK1P39086 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GRIK1P39086 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIK1P39086 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GRIK1P39086 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
GRIK1P39086 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
GRIK1P39086 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GRIK1P39086 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
GRIK1P39086 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GRIK1P39086 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
GRIK1P39086 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GRIK1P39086 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
GRIK1P39086 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GRIK1P39086 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
GRIK1P39086 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GRIK1P39086 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.16■□□□□ 0.66
GRIK1P39086 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.16■□□□□ 0.66
GRIK1P39086 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GRIK1P39086 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.16■□□□□ 0.66
GRIK1P39086 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.16■□□□□ 0.66
GRIK1P39086 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.16■□□□□ 0.66
GRIK1P39086 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.16■□□□□ 0.66
GRIK1P39086 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GRIK1P39086 LINC00602-201ENST00000629776 2065 ntBASIC19.16■□□□□ 0.66
GRIK1P39086 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GRIK1P39086 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GRIK1P39086 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GRIK1P39086 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
GRIK1P39086 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.16■□□□□ 0.66
GRIK1P39086 AC073592.3-201ENST00000625118 1834 ntBASIC19.16■□□□□ 0.66
GRIK1P39086 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
GRIK1P39086 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
GRIK1P39086 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
GRIK1P39086 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
GRIK1P39086 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.15■□□□□ 0.66
GRIK1P39086 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GRIK1P39086 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.15■□□□□ 0.66
GRIK1P39086 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.15■□□□□ 0.66
GRIK1P39086 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GRIK1P39086 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GRIK1P39086 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GRIK1P39086 WIZP1-201ENST00000531444 2299 ntBASIC19.15■□□□□ 0.66
GRIK1P39086 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.15■□□□□ 0.66
GRIK1P39086 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GRIK1P39086 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GRIK1P39086 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GRIK1P39086 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.15■□□□□ 0.66
GRIK1P39086 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GRIK1P39086 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GRIK1P39086 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GRIK1P39086 AC011840.4-201ENST00000578471 627 ntBASIC19.15■□□□□ 0.66
GRIK1P39086 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.15■□□□□ 0.66
GRIK1P39086 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.15■□□□□ 0.66
GRIK1P39086 Z69720.1-201ENST00000601483 472 ntBASIC19.15■□□□□ 0.66
GRIK1P39086 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
GRIK1P39086 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.15■□□□□ 0.66
GRIK1P39086 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GRIK1P39086 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GRIK1P39086 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.15■□□□□ 0.66
GRIK1P39086 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GRIK1P39086 AC233702.3-201ENST00000578656 1387 ntBASIC19.15■□□□□ 0.66
GRIK1P39086 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GRIK1P39086 ESPNP-201ENST00000270691 2015 ntBASIC19.15■□□□□ 0.66
GRIK1P39086 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.15■□□□□ 0.66
GRIK1P39086 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GRIK1P39086 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.15■□□□□ 0.66
GRIK1P39086 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
GRIK1P39086 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.14■□□□□ 0.66
GRIK1P39086 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
GRIK1P39086 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
GRIK1P39086 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.14■□□□□ 0.66
GRIK1P39086 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
GRIK1P39086 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.14■□□□□ 0.65
GRIK1P39086 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
GRIK1P39086 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GRIK1P39086 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GRIK1P39086 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GRIK1P39086 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
GRIK1P39086 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GRIK1P39086 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.14■□□□□ 0.65
GRIK1P39086 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms