Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC172P0C7W6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC172P0C7W6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC172P0C7W6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC172P0C7W6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC172P0C7W6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC172P0C7W6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CCDC172P0C7W6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC172P0C7W6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC172P0C7W6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CCDC172P0C7W6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC172P0C7W6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC172P0C7W6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC172P0C7W6 REXO1L9P-201ENST00000604264 2108 ntBASIC19.72■□□□□ 0.75
CCDC172P0C7W6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC172P0C7W6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 AC139713.2-201ENST00000641328 2723 ntBASIC19.71■□□□□ 0.75
CCDC172P0C7W6 AC008764.6-201ENST00000595909 2069 ntBASIC19.71■□□□□ 0.75
CCDC172P0C7W6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 AC092338.2-201ENST00000568827 1415 ntBASIC19.71■□□□□ 0.75
CCDC172P0C7W6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 MIR3180-4-201ENST00000582223 153 ntBASIC19.71■□□□□ 0.75
CCDC172P0C7W6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC172P0C7W6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.71■□□□□ 0.74
CCDC172P0C7W6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
CCDC172P0C7W6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC172P0C7W6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC172P0C7W6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC172P0C7W6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CCDC172P0C7W6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC172P0C7W6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC172P0C7W6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCDC172P0C7W6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC172P0C7W6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC172P0C7W6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.7■□□□□ 0.74
CCDC172P0C7W6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC172P0C7W6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC172P0C7W6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC172P0C7W6 CR769767.2-201ENST00000622735 460 ntBASIC19.7■□□□□ 0.74
CCDC172P0C7W6 AC010653.2-201ENST00000623505 997 ntBASIC19.7■□□□□ 0.74
CCDC172P0C7W6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC172P0C7W6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC172P0C7W6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC172P0C7W6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC172P0C7W6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC172P0C7W6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC172P0C7W6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC172P0C7W6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC172P0C7W6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC172P0C7W6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC172P0C7W6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 SDHAP2-201ENST00000455183 2001 ntBASIC19.69■□□□□ 0.74
CCDC172P0C7W6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 TSPY7P-201ENST00000431358 1114 ntBASIC19.69■□□□□ 0.74
CCDC172P0C7W6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms