Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRPRAP08240 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRPRAP08240 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRPRAP08240 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SRPRAP08240 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.35■□□□□ 0.53
SRPRAP08240 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.35■□□□□ 0.53
SRPRAP08240 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.35■□□□□ 0.53
SRPRAP08240 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRPRAP08240 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRPRAP08240 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.35■□□□□ 0.53
SRPRAP08240 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRPRAP08240 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.35■□□□□ 0.53
SRPRAP08240 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.35■□□□□ 0.53
SRPRAP08240 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.35■□□□□ 0.53
SRPRAP08240 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.35■□□□□ 0.53
SRPRAP08240 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.35■□□□□ 0.53
SRPRAP08240 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.35■□□□□ 0.53
SRPRAP08240 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.35■□□□□ 0.53
SRPRAP08240 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.35■□□□□ 0.53
SRPRAP08240 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.35■□□□□ 0.53
SRPRAP08240 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRPRAP08240 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.35■□□□□ 0.53
SRPRAP08240 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.35■□□□□ 0.53
SRPRAP08240 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRPRAP08240 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
SRPRAP08240 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRPRAP08240 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRPRAP08240 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.35■□□□□ 0.53
SRPRAP08240 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
SRPRAP08240 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRPRAP08240 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRPRAP08240 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.35■□□□□ 0.53
SRPRAP08240 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRPRAP08240 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRPRAP08240 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.34■□□□□ 0.53
SRPRAP08240 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SRPRAP08240 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRPRAP08240 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRPRAP08240 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRPRAP08240 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRPRAP08240 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SRPRAP08240 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRPRAP08240 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SRPRAP08240 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRPRAP08240 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SRPRAP08240 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRPRAP08240 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRPRAP08240 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.34■□□□□ 0.53
SRPRAP08240 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.34■□□□□ 0.53
SRPRAP08240 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.34■□□□□ 0.53
SRPRAP08240 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.34■□□□□ 0.53
SRPRAP08240 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRPRAP08240 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRPRAP08240 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRPRAP08240 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRPRAP08240 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRPRAP08240 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.34■□□□□ 0.53
SRPRAP08240 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRPRAP08240 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRPRAP08240 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRPRAP08240 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRPRAP08240 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRPRAP08240 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRPRAP08240 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.34■□□□□ 0.53
SRPRAP08240 ESPNP-201ENST00000270691 2015 ntBASIC18.33■□□□□ 0.53
SRPRAP08240 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRPRAP08240 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRPRAP08240 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRPRAP08240 AC120498.9-201ENST00000339021 3867 ntBASIC18.33■□□□□ 0.53
SRPRAP08240 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRPRAP08240 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRPRAP08240 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRPRAP08240 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.33■□□□□ 0.53
SRPRAP08240 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRPRAP08240 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.33■□□□□ 0.53
SRPRAP08240 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRPRAP08240 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SRPRAP08240 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRPRAP08240 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SRPRAP08240 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRPRAP08240 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRPRAP08240 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRPRAP08240 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRPRAP08240 AC026396.1-201ENST00000419388 421 ntBASIC18.33■□□□□ 0.52
SRPRAP08240 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.33■□□□□ 0.52
SRPRAP08240 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
SRPRAP08240 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRPRAP08240 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.33■□□□□ 0.52
SRPRAP08240 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRPRAP08240 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRPRAP08240 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SRPRAP08240 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.32■□□□□ 0.52
SRPRAP08240 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRPRAP08240 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.32■□□□□ 0.52
SRPRAP08240 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRPRAP08240 AL020996.1-203ENST00000536896 2307 ntBASIC18.32■□□□□ 0.52
SRPRAP08240 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
SRPRAP08240 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRPRAP08240 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRPRAP08240 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms