Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PRAMEF2O60811 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEF2O60811 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF2O60811 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF2O60811 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF2O60811 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PRAMEF2O60811 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PRAMEF2O60811 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF2O60811 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF2O60811 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEF2O60811 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF2O60811 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF2O60811 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.11■□□□□ 0.33
PRAMEF2O60811 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEF2O60811 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.11■□□□□ 0.33
PRAMEF2O60811 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF2O60811 AC104581.1-202ENST00000635932 2618 ntBASIC17.11■□□□□ 0.33
PRAMEF2O60811 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF2O60811 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
PRAMEF2O60811 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF2O60811 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.11■□□□□ 0.33
PRAMEF2O60811 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEF2O60811 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF2O60811 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.11■□□□□ 0.33
PRAMEF2O60811 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.11■□□□□ 0.33
PRAMEF2O60811 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF2O60811 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEF2O60811 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PRAMEF2O60811 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PRAMEF2O60811 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF2O60811 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
PRAMEF2O60811 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF2O60811 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF2O60811 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF2O60811 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEF2O60811 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF2O60811 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF2O60811 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEF2O60811 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF2O60811 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF2O60811 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PRAMEF2O60811 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF2O60811 SDHAP2-201ENST00000455183 2001 ntBASIC17.1■□□□□ 0.33
PRAMEF2O60811 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF2O60811 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF2O60811 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF2O60811 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF2O60811 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
PRAMEF2O60811 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.1■□□□□ 0.33
PRAMEF2O60811 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PRAMEF2O60811 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PRAMEF2O60811 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.1■□□□□ 0.33
PRAMEF2O60811 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
PRAMEF2O60811 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.1■□□□□ 0.33
PRAMEF2O60811 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF2O60811 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF2O60811 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF2O60811 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF2O60811 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF2O60811 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.1■□□□□ 0.33
PRAMEF2O60811 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PRAMEF2O60811 AL162741.1-201ENST00000565563 1558 ntBASIC17.1■□□□□ 0.33
PRAMEF2O60811 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF2O60811 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF2O60811 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.1■□□□□ 0.33
PRAMEF2O60811 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF2O60811 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF2O60811 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF2O60811 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF2O60811 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
PRAMEF2O60811 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF2O60811 ATP5G2P1-201ENST00000433580 426 ntBASIC17.09■□□□□ 0.33
PRAMEF2O60811 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.09■□□□□ 0.33
PRAMEF2O60811 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PRAMEF2O60811 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF2O60811 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.09■□□□□ 0.33
PRAMEF2O60811 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.09■□□□□ 0.33
PRAMEF2O60811 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PRAMEF2O60811 AL157888.1-201ENST00000631930 593 ntBASIC17.09■□□□□ 0.33
PRAMEF2O60811 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF2O60811 GMCL1P1-201ENST00000463439 1581 ntBASIC17.09■□□□□ 0.33
PRAMEF2O60811 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PRAMEF2O60811 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PRAMEF2O60811 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.09■□□□□ 0.33
PRAMEF2O60811 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF2O60811 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF2O60811 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF2O60811 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF2O60811 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF2O60811 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF2O60811 AC090340.1-201ENST00000620778 4980 ntBASIC17.09■□□□□ 0.33
PRAMEF2O60811 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.09■□□□□ 0.33
PRAMEF2O60811 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF2O60811 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.08■□□□□ 0.33
PRAMEF2O60811 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEF2O60811 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEF2O60811 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PRAMEF2O60811 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF2O60811 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.32
PRAMEF2O60811 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms