Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC009065.1-201ENST00000564055 1225 ntBASIC20.46■□□□□ 0.87
ACTN4O43707 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.46■□□□□ 0.87
ACTN4O43707 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ACTN4O43707 AC024243.1-201ENST00000609234 778 ntBASIC20.46■□□□□ 0.87
ACTN4O43707 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.46■□□□□ 0.87
ACTN4O43707 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ACTN4O43707 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ACTN4O43707 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ACTN4O43707 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.46■□□□□ 0.87
ACTN4O43707 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.46■□□□□ 0.87
ACTN4O43707 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
ACTN4O43707 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ACTN4O43707 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ACTN4O43707 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ACTN4O43707 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.45■□□□□ 0.87
ACTN4O43707 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACTN4O43707 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
ACTN4O43707 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACTN4O43707 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACTN4O43707 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ACTN4O43707 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACTN4O43707 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
ACTN4O43707 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACTN4O43707 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACTN4O43707 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACTN4O43707 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACTN4O43707 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ACTN4O43707 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACTN4O43707 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.45■□□□□ 0.86
ACTN4O43707 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACTN4O43707 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
ACTN4O43707 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACTN4O43707 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
ACTN4O43707 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACTN4O43707 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACTN4O43707 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.45■□□□□ 0.86
ACTN4O43707 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ACTN4O43707 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ACTN4O43707 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ACTN4O43707 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
ACTN4O43707 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ACTN4O43707 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
ACTN4O43707 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.44■□□□□ 0.86
ACTN4O43707 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.44■□□□□ 0.86
ACTN4O43707 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
ACTN4O43707 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
ACTN4O43707 AC006116.8-202ENST00000587620 1550 ntBASIC20.44■□□□□ 0.86
ACTN4O43707 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ACTN4O43707 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.44■□□□□ 0.86
ACTN4O43707 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.44■□□□□ 0.86
ACTN4O43707 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.44■□□□□ 0.86
ACTN4O43707 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ACTN4O43707 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
ACTN4O43707 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
ACTN4O43707 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
ACTN4O43707 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ACTN4O43707 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.44■□□□□ 0.86
ACTN4O43707 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ACTN4O43707 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ACTN4O43707 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ACTN4O43707 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ACTN4O43707 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ACTN4O43707 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ACTN4O43707 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ACTN4O43707 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.44■□□□□ 0.86
ACTN4O43707 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ACTN4O43707 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ACTN4O43707 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.43■□□□□ 0.86
ACTN4O43707 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ACTN4O43707 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.43■□□□□ 0.86
ACTN4O43707 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ACTN4O43707 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.43■□□□□ 0.86
ACTN4O43707 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ACTN4O43707 HMGA1P5-201ENST00000412453 271 ntBASIC20.43■□□□□ 0.86
ACTN4O43707 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.43■□□□□ 0.86
ACTN4O43707 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.43■□□□□ 0.86
ACTN4O43707 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.43■□□□□ 0.86
ACTN4O43707 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.43■□□□□ 0.86
ACTN4O43707 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.43■□□□□ 0.86
ACTN4O43707 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.43■□□□□ 0.86
ACTN4O43707 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ACTN4O43707 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ACTN4O43707 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ACTN4O43707 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ACTN4O43707 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ACTN4O43707 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ACTN4O43707 AC012317.2-201ENST00000623305 2251 ntBASIC20.43■□□□□ 0.86
ACTN4O43707 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ACTN4O43707 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
ACTN4O43707 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.43■□□□□ 0.86
ACTN4O43707 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.43■□□□□ 0.86
ACTN4O43707 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
ACTN4O43707 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ACTN4O43707 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ACTN4O43707 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ACTN4O43707 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ACTN4O43707 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ACTN4O43707 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ACTN4O43707 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ACTN4O43707 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms