Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
PALM3A6NDB9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PALM3A6NDB9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PALM3A6NDB9 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PALM3A6NDB9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21■□□□□ 0.95
PALM3A6NDB9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PALM3A6NDB9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PALM3A6NDB9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21■□□□□ 0.95
PALM3A6NDB9 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PALM3A6NDB9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21■□□□□ 0.95
PALM3A6NDB9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21■□□□□ 0.95
PALM3A6NDB9 KRT18P65-201ENST00000439811 1286 ntBASIC21■□□□□ 0.95
PALM3A6NDB9 HCG4P8-203ENST00000443049 980 ntBASIC21■□□□□ 0.95
PALM3A6NDB9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21■□□□□ 0.95
PALM3A6NDB9 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PALM3A6NDB9 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21■□□□□ 0.95
PALM3A6NDB9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
PALM3A6NDB9 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21■□□□□ 0.95
PALM3A6NDB9 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21■□□□□ 0.95
PALM3A6NDB9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21■□□□□ 0.95
PALM3A6NDB9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PALM3A6NDB9 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21■□□□□ 0.95
PALM3A6NDB9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PALM3A6NDB9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PALM3A6NDB9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21■□□□□ 0.95
PALM3A6NDB9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PALM3A6NDB9 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21■□□□□ 0.95
PALM3A6NDB9 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21■□□□□ 0.95
PALM3A6NDB9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21■□□□□ 0.95
PALM3A6NDB9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21■□□□□ 0.95
PALM3A6NDB9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PALM3A6NDB9 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PALM3A6NDB9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.99■□□□□ 0.95
PALM3A6NDB9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PALM3A6NDB9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PALM3A6NDB9 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PALM3A6NDB9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PALM3A6NDB9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
PALM3A6NDB9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PALM3A6NDB9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PALM3A6NDB9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.99■□□□□ 0.95
PALM3A6NDB9 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PALM3A6NDB9 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.99■□□□□ 0.95
PALM3A6NDB9 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PALM3A6NDB9 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PALM3A6NDB9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.99■□□□□ 0.95
PALM3A6NDB9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.99■□□□□ 0.95
PALM3A6NDB9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PALM3A6NDB9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PALM3A6NDB9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PALM3A6NDB9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.99■□□□□ 0.95
PALM3A6NDB9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.99■□□□□ 0.95
PALM3A6NDB9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PALM3A6NDB9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
PALM3A6NDB9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.99■□□□□ 0.95
PALM3A6NDB9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PALM3A6NDB9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PALM3A6NDB9 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PALM3A6NDB9 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.98■□□□□ 0.95
PALM3A6NDB9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PALM3A6NDB9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.98■□□□□ 0.95
PALM3A6NDB9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.98■□□□□ 0.95
PALM3A6NDB9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PALM3A6NDB9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.98■□□□□ 0.95
PALM3A6NDB9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PALM3A6NDB9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PALM3A6NDB9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PALM3A6NDB9 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PALM3A6NDB9 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.98■□□□□ 0.95
PALM3A6NDB9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PALM3A6NDB9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
PALM3A6NDB9 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.98■□□□□ 0.95
PALM3A6NDB9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PALM3A6NDB9 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PALM3A6NDB9 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PALM3A6NDB9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PALM3A6NDB9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PALM3A6NDB9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PALM3A6NDB9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.98■□□□□ 0.95
PALM3A6NDB9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PALM3A6NDB9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.98■□□□□ 0.95
PALM3A6NDB9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PALM3A6NDB9 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PALM3A6NDB9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PALM3A6NDB9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PALM3A6NDB9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PALM3A6NDB9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PALM3A6NDB9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PALM3A6NDB9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.97■□□□□ 0.95
PALM3A6NDB9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.97■□□□□ 0.95
PALM3A6NDB9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.97■□□□□ 0.95
PALM3A6NDB9 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PALM3A6NDB9 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.97■□□□□ 0.95
PALM3A6NDB9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PALM3A6NDB9 TOB2P1-201ENST00000469761 992 ntBASIC20.97■□□□□ 0.95
PALM3A6NDB9 AC091607.1-201ENST00000490318 1060 ntBASIC20.97■□□□□ 0.95
PALM3A6NDB9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.97■□□□□ 0.95
PALM3A6NDB9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
PALM3A6NDB9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PALM3A6NDB9 BICD1-207ENST00000551848 1962 ntBASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms