Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 AC069148.1-201ENST00000608741 768 ntBASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 ESPNP-201ENST00000270691 2015 ntBASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 AC005082.1-201ENST00000413042 2259 ntBASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DNMT3AQ9Y6K1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
DNMT3AQ9Y6K1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
DNMT3AQ9Y6K1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
DNMT3AQ9Y6K1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
DNMT3AQ9Y6K1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DNMT3AQ9Y6K1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.85■□□□□ 0.45
DNMT3AQ9Y6K1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.85■□□□□ 0.45
DNMT3AQ9Y6K1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.85■□□□□ 0.45
DNMT3AQ9Y6K1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.85■□□□□ 0.45
DNMT3AQ9Y6K1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.85■□□□□ 0.45
DNMT3AQ9Y6K1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
DNMT3AQ9Y6K1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
DNMT3AQ9Y6K1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.85■□□□□ 0.45
DNMT3AQ9Y6K1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.85■□□□□ 0.45
DNMT3AQ9Y6K1 AC090616.6-201ENST00000582640 721 ntBASIC17.85■□□□□ 0.45
DNMT3AQ9Y6K1 AC016734.2-201ENST00000624325 1377 ntBASIC17.85■□□□□ 0.45
DNMT3AQ9Y6K1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.85■□□□□ 0.45
DNMT3AQ9Y6K1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DNMT3AQ9Y6K1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
DNMT3AQ9Y6K1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 UPK3BP1-201ENST00000428678 509 ntBASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 GUSBP12-201ENST00000513727 720 ntBASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 AC004263.2-201ENST00000617183 678 ntBASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DNMT3AQ9Y6K1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
DNMT3AQ9Y6K1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.83■□□□□ 0.45
DNMT3AQ9Y6K1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
DNMT3AQ9Y6K1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DNMT3AQ9Y6K1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DNMT3AQ9Y6K1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DNMT3AQ9Y6K1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
DNMT3AQ9Y6K1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
DNMT3AQ9Y6K1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
DNMT3AQ9Y6K1 AC090164.3-201ENST00000610780 2143 ntBASIC17.83■□□□□ 0.45
DNMT3AQ9Y6K1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DNMT3AQ9Y6K1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DNMT3AQ9Y6K1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms