Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPSNAP3AQ9UFN0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPSNAP3AQ9UFN0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPSNAP3AQ9UFN0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.47■□□□□ 0.39
NIPSNAP3AQ9UFN0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPSNAP3AQ9UFN0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPSNAP3AQ9UFN0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.47■□□□□ 0.39
NIPSNAP3AQ9UFN0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
NIPSNAP3AQ9UFN0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 AP000593.1-201ENST00000393668 712 ntBASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 AL096828.2-201ENST00000567259 1965 ntBASIC17.46■□□□□ 0.39
NIPSNAP3AQ9UFN0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
NIPSNAP3AQ9UFN0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 AC073648.6-201ENST00000641589 218 ntBASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NIPSNAP3AQ9UFN0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 MIR564-202ENST00000385049 94 ntBASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 MCCD1P1-208ENST00000445732 328 ntBASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 AC006058.3-201ENST00000606217 1069 ntBASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 AC130371.2-201ENST00000619443 611 ntBASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NIPSNAP3AQ9UFN0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms