Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SPHK1Q9NYA1 AL353692.3-201ENST00000407031 1396 ntBASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 TSSC2-201ENST00000450217 709 ntBASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SPHK1Q9NYA1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 PHGDH-209ENST00000641074 1780 ntBASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 AP002383.4-201ENST00000442518 975 ntBASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 AC113404.2-201ENST00000507884 177 ntBASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SPHK1Q9NYA1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 AC135776.1-201ENST00000319817 2481 ntBASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 LINC00602-201ENST00000629776 2065 ntBASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 AC008687.5-201ENST00000593746 558 ntBASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 NPAP1P7-201ENST00000613027 823 ntBASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPHK1Q9NYA1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms